Literature DB >> 19642019

Independently inducible system of gene expression for condensed single protein production (cSPP) suitable for high efficiency isotope enrichment.

William M Schneider1, Masayori Inouye, Gaetano T Montelione, Monica J Roth.   

Abstract

The ability to produce isotope-enriched proteins is fundamental to the success of modern protein NMR, and is particularly essential for NMR activities in structural genomics projects. Conventional methods of protein production often prove to be cost prohibitive for obtaining samples, particularly perdeuterated and site-specifically labeled proteins. The condensed single protein production system (cSPP), providing protein expression following condensation of cells 10-40 fold, allows for the production of such samples at a fraction of the cost. The previously described cSPP system is a two plasmid system where both the MazF toxin and ACA-less target gene are coinduced with IPTG. Coinduction results in 10-20% of the target protein produced without isotopic enrichment. Though the unlabeled protein is generally not visible in isotope-filtered NMR experiments, it results in an effective reduction in yield of the observable sample. By altering the cSPP system and separating the induction of the MazF toxin, required to convert cells into a semiquiescent state prior to condensation, from the expression of the target gene, we are now able to eliminate the unlabeled protein fraction and improve the isotope incorporation. Here we describe a series of pCold(tet) vectors with various features that can be used in the dual inducible cSPP(tet) system to obtain high-quality isotopically enriched protein at as little as 2.5% the cost of traditional methods.

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Year:  2009        PMID: 19642019      PMCID: PMC4898478          DOI: 10.1007/s10969-009-9067-x

Source DB:  PubMed          Journal:  J Struct Funct Genomics        ISSN: 1345-711X


  7 in total

1.  Translational enhancement by an element downstream of the initiation codon in Escherichia coli.

Authors:  J P Etchegaray; M Inouye
Journal:  J Biol Chem       Date:  1999-04-09       Impact factor: 5.157

2.  Single protein production in living cells facilitated by an mRNA interferase.

Authors:  Motoo Suzuki; Junjie Zhang; Mohan Liu; Nancy A Woychik; Masayori Inouye
Journal:  Mol Cell       Date:  2005-04-15       Impact factor: 17.970

3.  Single protein production (SPP) system in Escherichia coli.

Authors:  Motoo Suzuki; Lili Mao; Masayori Inouye
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

4.  Bacterial bioreactors for high yield production of recombinant protein.

Authors:  Motoo Suzuki; Rohini Roy; Haiyan Zheng; Nancy Woychik; Masayori Inouye
Journal:  J Biol Chem       Date:  2006-10-04       Impact factor: 5.157

5.  High-resolution structure of the oligomerization domain of p53 by multidimensional NMR.

Authors:  G M Clore; J G Omichinski; K Sakaguchi; N Zambrano; H Sakamoto; E Appella; A M Gronenborn
Journal:  Science       Date:  1994-07-15       Impact factor: 47.728

6.  Cold-shock induced high-yield protein production in Escherichia coli.

Authors:  Guoliang Qing; Li-Chung Ma; Ahmad Khorchid; G V T Swapna; Tapas K Mal; Masanori Mitta Takayama; Bing Xia; Sangita Phadtare; Haiping Ke; Thomas Acton; Gaetano T Montelione; Mitsuhiko Ikura; Masayori Inouye
Journal:  Nat Biotechnol       Date:  2004-06-13       Impact factor: 54.908

7.  HIV1 integrase expressed in Escherichia coli from a synthetic gene.

Authors:  T P Holler; S K Foltin; Q Z Ye; D J Hupe
Journal:  Gene       Date:  1993-12-22       Impact factor: 3.688

  7 in total
  7 in total

Review 1.  Advances in protein NMR provided by the NIGMS Protein Structure Initiative: impact on drug discovery.

Authors:  Gaetano T Montelione; Thomas Szyperski
Journal:  Curr Opin Drug Discov Devel       Date:  2010-05

2.  Protein structure prediction assisted with sparse NMR data in CASP13.

Authors:  Davide Sala; Yuanpeng Janet Huang; Casey A Cole; David A Snyder; Gaohua Liu; Yojiro Ishida; G V T Swapna; Kelly P Brock; Chris Sander; Krzysztof Fidelis; Andriy Kryshtafovych; Masayori Inouye; Roberto Tejero; Homayoun Valafar; Antonio Rosato; Gaetano T Montelione
Journal:  Proteins       Date:  2019-12

3.  Preparation of protein samples for NMR structure, function, and small-molecule screening studies.

Authors:  Thomas B Acton; Rong Xiao; Stephen Anderson; James Aramini; William A Buchwald; Colleen Ciccosanti; Ken Conover; John Everett; Keith Hamilton; Yuanpeng Janet Huang; Haleema Janjua; Gregory Kornhaber; Jessica Lau; Dong Yup Lee; Gaohua Liu; Melissa Maglaqui; Lichung Ma; Lei Mao; Dayaban Patel; Paolo Rossi; Seema Sahdev; Ritu Shastry; G V T Swapna; Yeufeng Tang; Saichiu Tong; Dongyan Wang; Huang Wang; Li Zhao; Gaetano T Montelione
Journal:  Methods Enzymol       Date:  2011       Impact factor: 1.600

4.  Use of amino acids as inducers for high-level protein expression in the single-protein production system.

Authors:  S Thangminlal Vaiphei; Lili Mao; Tsutomu Shimazu; Jung-Ho Park; Masayori Inouye
Journal:  Appl Environ Microbiol       Date:  2010-07-23       Impact factor: 4.792

5.  Efficient condensed-phase production of perdeuterated soluble and membrane proteins.

Authors:  William M Schneider; Yuefeng Tang; S Thangminlal Vaiphei; Lili Mao; Melissa Maglaqui; Masayori Inouye; Monica J Roth; Gaetano T Montelione
Journal:  J Struct Funct Genomics       Date:  2010-03-24

6.  Assessment of prediction methods for protein structures determined by NMR in CASP14: Impact of AlphaFold2.

Authors:  Yuanpeng Janet Huang; Ning Zhang; Beate Bersch; Krzysztof Fidelis; Masayori Inouye; Yojiro Ishida; Andriy Kryshtafovych; Naohiro Kobayashi; Yutaka Kuroda; Gaohua Liu; Andy LiWang; G V T Swapna; Nan Wu; Toshio Yamazaki; Gaetano T Montelione
Journal:  Proteins       Date:  2021-10-19

7.  (19)F NMR reveals multiple conformations at the dimer interface of the nonstructural protein 1 effector domain from influenza A virus.

Authors:  James M Aramini; Keith Hamilton; Li-Chung Ma; G V T Swapna; Paul G Leonard; John E Ladbury; Robert M Krug; Gaetano T Montelione
Journal:  Structure       Date:  2014-02-27       Impact factor: 5.006

  7 in total

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