Literature DB >> 19628015

"Splicing up" drug discovery. Cell-based expression and screening of genetically-encoded libraries of backbone-cyclized polypeptides.

Harshkumar Sancheti1, Julio A Camarero.   

Abstract

The present paper reviews the use of protein splicing for the biosynthesis of backbone cyclic polypeptides. This general method allows the in vivo and in vitro biosynthesis of cyclic polypeptides using recombinant DNA expression techniques. Biosynthetic access to backbone cyclic peptides opens the possibility to generate cell-based combinatorial libraries that can be screened inside living cells for their ability to attenuate or inhibit cellular processes thus providing a new way for finding therapeutic agents.

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Year:  2009        PMID: 19628015      PMCID: PMC3329944          DOI: 10.1016/j.addr.2009.07.003

Source DB:  PubMed          Journal:  Adv Drug Deliv Rev        ISSN: 0169-409X            Impact factor:   15.470


  69 in total

1.  Single-column purification of free recombinant proteins using a self-cleavable affinity tag derived from a protein splicing element.

Authors:  S Chong; F B Mersha; D G Comb; M E Scott; D Landry; L M Vence; F B Perler; J Benner; R B Kucera; C A Hirvonen; J J Pelletier; H Paulus; M Q Xu
Journal:  Gene       Date:  1997-06-19       Impact factor: 3.688

Review 2.  Polyketide and nonribosomal peptide antibiotics: modularity and versatility.

Authors:  Christopher T Walsh
Journal:  Science       Date:  2004-03-19       Impact factor: 47.728

Review 3.  Sortases and the art of anchoring proteins to the envelopes of gram-positive bacteria.

Authors:  Luciano A Marraffini; Andrea C Dedent; Olaf Schneewind
Journal:  Microbiol Mol Biol Rev       Date:  2006-03       Impact factor: 11.056

4.  Biosynthesis of a fully functional cyclotide inside living bacterial cells.

Authors:  Julio A Camarero; Richard H Kimura; Youn-Hi Woo; Alexander Shekhtman; Jason Cantor
Journal:  Chembiochem       Date:  2007-08-13       Impact factor: 3.164

5.  Semisynthesis of cytotoxic proteins using a modified protein splicing element.

Authors:  T C Evans; J Benner; M Q Xu
Journal:  Protein Sci       Date:  1998-11       Impact factor: 6.725

6.  The mechanism of protein splicing and its modulation by mutation.

Authors:  M Q Xu; F B Perler
Journal:  EMBO J       Date:  1996-10-01       Impact factor: 11.598

7.  Squash trypsin inhibitors from Momordica cochinchinensis exhibit an atypical macrocyclic structure.

Authors:  J F Hernandez; J Gagnon; L Chiche; T M Nguyen; J P Andrieu; A Heitz; T Trinh Hong; T T Pham; D Le Nguyen
Journal:  Biochemistry       Date:  2000-05-16       Impact factor: 3.162

8.  Solution structures by 1H NMR of the novel cyclic trypsin inhibitor SFTI-1 from sunflower seeds and an acyclic permutant.

Authors:  M L Korsinczky; H J Schirra; K J Rosengren; J West; B A Condie; L Otvos; M A Anderson; D J Craik
Journal:  J Mol Biol       Date:  2001-08-17       Impact factor: 5.469

9.  Expressed protein ligation: a general method for protein engineering.

Authors:  T W Muir; D Sondhi; P A Cole
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

10.  The cyclic cystine knot miniprotein MCoTI-II is internalized into cells by macropinocytosis.

Authors:  Kathryn P Greenwood; Norelle L Daly; Darren L Brown; Jennifer L Stow; David J Craik
Journal:  Int J Biochem Cell Biol       Date:  2007-07-07       Impact factor: 5.085

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  26 in total

1.  Biosynthesis and antimicrobial evaluation of backbone-cyclized α-defensins.

Authors:  Angie E Garcia; Kenneth P Tai; Shadakshara S Puttamadappa; Alexander Shekhtman; Andre J Ouellette; Julio A Camarero
Journal:  Biochemistry       Date:  2011-11-09       Impact factor: 3.162

Review 2.  Biological synthesis of circular polypeptides.

Authors:  Teshome L Aboye; Julio A Camarero
Journal:  J Biol Chem       Date:  2012-06-14       Impact factor: 5.157

3.  Peptide bicycles that inhibit the Grb2 SH2 domain.

Authors:  Justin S Quartararo; Pianpian Wu; Joshua A Kritzer
Journal:  Chembiochem       Date:  2012-06-11       Impact factor: 3.164

Review 4.  Using backbone-cyclized Cys-rich polypeptides as molecular scaffolds to target protein-protein interactions.

Authors:  Dipankar Chaudhuri; Teshome Aboye; Julio A Camarero
Journal:  Biochem J       Date:  2019-01-11       Impact factor: 3.857

Review 5.  Recent progress in intein research: from mechanism to directed evolution and applications.

Authors:  Gerrit Volkmann; Henning D Mootz
Journal:  Cell Mol Life Sci       Date:  2012-08-28       Impact factor: 9.261

Review 6.  Intein applications: from protein purification and labeling to metabolic control methods.

Authors:  David W Wood; Julio A Camarero
Journal:  J Biol Chem       Date:  2014-04-02       Impact factor: 5.157

7.  Expression of fluorescent cyclotides using protein trans-splicing for easy monitoring of cyclotide-protein interactions.

Authors:  Krishnappa Jagadish; Radhika Borra; Vanessa Lacey; Subhabrata Majumder; Alexander Shekhtman; Lei Wang; Julio A Camarero
Journal:  Angew Chem Int Ed Engl       Date:  2013-01-15       Impact factor: 15.336

Review 8.  Inteins, valuable genetic elements in molecular biology and biotechnology.

Authors:  Skander Elleuche; Stefanie Pöggeler
Journal:  Appl Microbiol Biotechnol       Date:  2010-05-07       Impact factor: 4.813

9.  The two-step biosynthesis of cyclic peptides from linear precursors in a member of the plant family Caryophyllaceae involves cyclization by a serine protease-like enzyme.

Authors:  Carla J S Barber; Pareshkumar T Pujara; Darwin W Reed; Shiela Chiwocha; Haixia Zhang; Patrick S Covello
Journal:  J Biol Chem       Date:  2013-03-13       Impact factor: 5.157

10.  Biosynthesis and biological screening of a genetically encoded library based on the cyclotide MCoTI-I.

Authors:  Jeffrey Austin; Wan Wang; Swamy Puttamadappa; Alexander Shekhtman; Julio A Camarero
Journal:  Chembiochem       Date:  2009-11-02       Impact factor: 3.164

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