Literature DB >> 20228407

Crystal structure of the nonerythroid alpha-spectrin tetramerization site reveals differences between erythroid and nonerythroid spectrin tetramer formation.

Shahila Mehboob1, Yuanli Song, Marta Witek, Fei Long, Bernard D Santarsiero, Michael E Johnson, Leslie W-M Fung.   

Abstract

We have solved the crystal structure of a segment of nonerythroid alpha-spectrin (alphaII) consisting of the first 147 residues to a resolution of 2.3 A. We find that the structure of this segment is generally similar to a corresponding segment from erythroid alpha-spectrin (alphaI) but exhibits unique differences with functional significance. Specific features include the following: (i) an irregular and frayed first helix (Helix C'); (ii) a helical conformation in the junction region connecting Helix C' with the first structural domain (D1); (iii) a long A(1)B(1) loop in D1; and (iv) specific inter-helix hydrogen bonds/salt bridges that stabilize D1. Our findings suggest that the hydrogen bond networks contribute to structural domain stability, and thus rigidity, in alphaII, and the lack of such hydrogen bond networks in alphaI leads to flexibility in alphaI. We have previously shown the junction region connecting Helix C' to D1 to be unstructured in alphaI (Park, S., Caffrey, M. S., Johnson, M. E., and Fung, L. W. (2003) J. Biol. Chem. 278, 21837-21844) and now find it to be helical in alphaII, an important difference for alpha-spectrin association with beta-spectrin in forming tetramers. Homology modeling and molecular dynamics simulation studies of the structure of the tetramerization site, a triple helical bundle of partial domain helices, show that mutations in alpha-spectrin will affect Helix C' structural flexibility and/or the junction region conformation and may alter the equilibrium between spectrin dimers and tetramers in cells. Mutations leading to reduced levels of functional tetramers in cells may potentially lead to abnormal neuronal functions.

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Year:  2010        PMID: 20228407      PMCID: PMC2863205          DOI: 10.1074/jbc.M109.080028

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  54 in total

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2.  Salt bridge stability in monomeric proteins.

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3.  alpha beta Spectrin coiled coil association at the tetramerization site.

Authors:  S Mehboob; B H Luo; B M Patel; L W Fung
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4.  Solution structural studies on human erythrocyte alpha-spectrin tetramerization site.

Authors:  Sunghyouk Park; Michael S Caffrey; Michael E Johnson; Leslie W-M Fung
Journal:  J Biol Chem       Date:  2003-04-01       Impact factor: 5.157

5.  PHENIX: building new software for automated crystallographic structure determination.

Authors:  Paul D Adams; Ralf W Grosse-Kunstleve; Li Wei Hung; Thomas R Ioerger; Airlie J McCoy; Nigel W Moriarty; Randy J Read; James C Sacchettini; Nicholas K Sauter; Thomas C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-10-21

6.  Structure validation by Calpha geometry: phi,psi and Cbeta deviation.

Authors:  Simon C Lovell; Ian W Davis; W Bryan Arendall; Paul I W de Bakker; J Michael Word; Michael G Prisant; Jane S Richardson; David C Richardson
Journal:  Proteins       Date:  2003-02-15

7.  Studies of the erythrocyte spectrin tetramerization region.

Authors:  S Park; S Mehboob; B H Luo; M Hurtuk; M E Johnson; L W Fung
Journal:  Cell Mol Biol Lett       Date:  2001       Impact factor: 5.787

8.  Nuclear magnetic resonance studies of mutations at the tetramerization region of human alpha spectrin.

Authors:  Sunghyouk Park; Michael E Johnson; Leslie W-M Fung
Journal:  Blood       Date:  2002-07-01       Impact factor: 22.113

9.  Small deletions disturb desmin architecture leading to breakdown of muscle cells and development of skeletal or cardioskeletal myopathy.

Authors:  Anna Kaminska; Sergei V Strelkov; Bertrand Goudeau; Montse Olivé; Ayush Dagvadorj; Anna Fidzianska; Monique Simon-Casteras; Alexey Shatunov; Marinos C Dalakas; Isidro Ferrer; Hubert Kwiecinski; Patrick Vicart; Lev G Goldfarb
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Authors:  Paola A Bignone; Anthony J Baines
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  15 in total

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Authors:  Yuanli Song; Chloe Antoniou; Adnan Memic; Brian K Kay; L W-M Fung
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Authors:  S L Shammas; J M Rogers; S A Hill; J Clarke
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4.  Fluorescence study of the effect of cholesterol on spectrin-aminophospholipid interactions.

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Journal:  Eur Biophys J       Date:  2015-07-17       Impact factor: 1.733

5.  Crystal structure and functional interpretation of the erythrocyte spectrin tetramerization domain complex.

Authors:  Jonathan J Ipsaro; Sandra L Harper; Troy E Messick; Ronen Marmorstein; Alfonso Mondragón; David W Speicher
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6.  The scavenger receptor SCARA1 (CD204) recognizes dead cells through spectrin.

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7.  Quantitative studies of caspase-3 catalyzed αII-spectrin breakdown.

Authors:  Marta A Witek; L W-M Fung
Journal:  Brain Res       Date:  2013-08-12       Impact factor: 3.252

8.  Non-erythroid beta spectrin interacting proteins and their effects on spectrin tetramerization.

Authors:  Akin Sevinc; Leslie W-M Fung
Journal:  Cell Mol Biol Lett       Date:  2011-08-24       Impact factor: 5.787

9.  Inhibition of calpain but not caspase activity by spectrin fragments.

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10.  Genomic approach to identify factors that drive the formation of three-dimensional structures by EA.hy926 endothelial cells.

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