Literature DB >> 19590118

Excitation spectroscopy in multispectral optical fluorescence tomography: methodology, feasibility and computer simulation studies.

Abhijit J Chaudhari1, Sangtae Ahn, Richard Levenson, Ramsey D Badawi, Simon R Cherry, Richard M Leahy.   

Abstract

Molecular probes used for in vivo optical fluorescence tomography (OFT) studies in small animals are typically chosen such that their emission spectra lie in the 680-850 nm wavelength range. This is because tissue attenuation in this spectral band is relatively low, allowing optical photons even from deep sites in tissue to reach the animal surface and consequently be detected by a CCD camera. The wavelength dependence of tissue optical properties within the 680-850 nm band can be exploited for emitted light by measuring fluorescent data via multispectral approaches and incorporating the spectral dependence of these optical properties into the OFT inverse problem-that of reconstructing underlying 3D fluorescent probe distributions from optical data collected on the animal surface. However, in the aforementioned spectral band, due to only small variations in the tissue optical properties, multispectral emission data, though superior for image reconstruction compared to achromatic data, tend to be somewhat redundant. A different spectral approach for OFT is to capitalize on the larger variations in the optical properties of tissue for excitation photons than for the emission photons by using excitation at multiple wavelengths as a means of decoding source depth in tissue. The full potential of spectral approaches in OFT can be realized by a synergistic combination of these two approaches, that is, exciting the underlying fluorescent probe at multiple wavelengths and measuring emission data multispectrally. In this paper, we describe a method that incorporates both excitation and emission spectral information into the OFT inverse problem. We describe a linear algebraic formulation of the multiple wavelength illumination-multispectral detection forward model for OFT and compare it to models that use only excitation at multiple wavelengths or those that use only multispectral detection techniques. This study is carried out in a realistic inhomogeneous mouse atlas using singular value decomposition and analysis of reconstructed spatial resolution versus noise. For simplicity, quantitative results have been shown for one representative fluorescent probe (Alexa 700) and effects due to tissue autofluorescence have not been taken into account. We also demonstrate the performance of our method for 3D reconstruction of tumors in a simulated mouse model of metastatic human hepatocellular carcinoma.

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Year:  2009        PMID: 19590118      PMCID: PMC2740369          DOI: 10.1088/0031-9155/54/15/004

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  71 in total

1.  Fluorescence optical diffusion tomography.

Authors:  Adam B Milstein; Seungseok Oh; Kevin J Webb; Charles A Bouman; Quan Zhang; David A Boas; R P Millane
Journal:  Appl Opt       Date:  2003-06-01       Impact factor: 1.980

2.  Fully adaptive FEM based fluorescence optical tomography from time-dependent measurements with area illumination and detection.

Authors:  Amit Joshi; Wolfgang Bangerth; Kildong Hwang; John C Rasmussen; Eva M Sevick-Muraca
Journal:  Med Phys       Date:  2006-05       Impact factor: 4.071

3.  Digimouse: a 3D whole body mouse atlas from CT and cryosection data.

Authors:  Belma Dogdas; David Stout; Arion F Chatziioannou; Richard M Leahy
Journal:  Phys Med Biol       Date:  2007-01-10       Impact factor: 3.609

4.  Would near-infrared fluorescence signals propagate through large human organs for clinical studies?

Authors:  Vasilis Ntziachristos; Jorge Ripoll; Ralph Weissleder
Journal:  Opt Lett       Date:  2002-03-01       Impact factor: 3.776

5.  A time domain fluorescence tomography system for small animal imaging.

Authors:  Anand T N Kumar; Scott B Raymond; Andrew K Dunn; Brian J Bacskai; David A Boas
Journal:  IEEE Trans Med Imaging       Date:  2008-08       Impact factor: 10.048

6.  Spatially varying regularization based on spectrally resolved fluorescence emission in fluorescence molecular tomography.

Authors:  Johan Axelsson; Jenny Svensson; Stefan Andersson-Engels
Journal:  Opt Express       Date:  2007-10-17       Impact factor: 3.894

7.  Fluorescence-enhanced optical tomography of a large tissue phantom using point illumination geometries.

Authors:  Ranadhir Roy; Anuradha Godavarty; Eva M Sevick-Muraca
Journal:  J Biomed Opt       Date:  2006 Jul-Aug       Impact factor: 3.170

8.  Fluorescence lifetime imaging system for in vivo studies.

Authors:  Moinuddin Hassan; Jason Riley; Victor Chernomordik; Paul Smith; Randall Pursley; Sang Bong Lee; Jacek Capala; Amir H Gandjbakhche
Journal:  Mol Imaging       Date:  2007 Jul-Aug       Impact factor: 4.488

9.  Time-dependent whole-body fluorescence tomography of probe bio-distributions in mice.

Authors:  Sachin Patwardhan; Sharon Bloch; Samuel Achilefu; Joseph Culver
Journal:  Opt Express       Date:  2005-04-04       Impact factor: 3.894

10.  Multispectral bioluminescence tomography: methodology and simulation.

Authors:  Alexander X Cong; Ge Wang
Journal:  Int J Biomed Imaging       Date:  2006-02-05
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  13 in total

1.  Topographic mapping of subsurface fluorescent structures in tissue using multiwavelength excitation.

Authors:  Anthony Kim; Mathieu Roy; Farhan N Dadani; Brian C Wilson
Journal:  J Biomed Opt       Date:  2010 Nov-Dec       Impact factor: 3.170

2.  Separating structures of different fluorophore concentrations by principal component analysis on multispectral excitation-resolved fluorescence tomography images.

Authors:  Huangsheng Pu; Wei He; Guanglei Zhang; Bin Zhang; Fei Liu; Yi Zhang; Jianwen Luo; Jing Bai
Journal:  Biomed Opt Express       Date:  2013-08-29       Impact factor: 3.732

3.  Macroscopic-imaging technique for subsurface quantification of near-infrared markers during surgery.

Authors:  Michael Jermyn; Kolbein Kolste; Julien Pichette; Guillaume Sheehy; Leticia Angulo-Rodríguez; Keith D Paulsen; David W Roberts; Brian C Wilson; Kevin Petrecca; Frederic Leblond
Journal:  J Biomed Opt       Date:  2015-03       Impact factor: 3.170

4.  Spectral-resolved cone-beam X-ray luminescence computed tomography with principle component analysis.

Authors:  Huangsheng Pu; Peng Gao; Junyan Rong; Wenli Zhang; Tianshuai Liu; Hongbing Lu
Journal:  Biomed Opt Express       Date:  2018-05-30       Impact factor: 3.732

5.  Illumination pattern optimization for fluorescence tomography: theory and simulation studies.

Authors:  Joyita Dutta; Sangtae Ahn; Anand A Joshi; Richard M Leahy
Journal:  Phys Med Biol       Date:  2010-04-30       Impact factor: 3.609

6.  Visualization of upconverting nanoparticles in strongly scattering media.

Authors:  E V Khaydukov; V A Semchishen; V N Seminogov; A V Nechaev; A V Zvyagin; V I Sokolov; A S Akhmanov; V Ya Panchenko
Journal:  Biomed Opt Express       Date:  2014-05-28       Impact factor: 3.732

7.  Joint L1 and total variation regularization for fluorescence molecular tomography.

Authors:  Joyita Dutta; Sangtae Ahn; Changqing Li; Simon R Cherry; Richard M Leahy
Journal:  Phys Med Biol       Date:  2012-03-05       Impact factor: 3.609

Review 8.  Radiologic and near-infrared/optical spectroscopic imaging: where is the synergy?

Authors:  Brian W Pogue; Frederic Leblond; Venkataramanan Krishnaswamy; Keith D Paulsen
Journal:  AJR Am J Roentgenol       Date:  2010-08       Impact factor: 3.959

9.  DigiWarp: a method for deformable mouse atlas warping to surface topographic data.

Authors:  Anand A Joshi; Abhijit J Chaudhari; Changqing Li; Joyita Dutta; Simon R Cherry; David W Shattuck; Arthur W Toga; Richard M Leahy
Journal:  Phys Med Biol       Date:  2010-09-30       Impact factor: 3.609

10.  Depth-Resolved Multispectral Sub-Surface Imaging Using Multifunctional Upconversion Phosphors with Paramagnetic Properties.

Authors:  Zaven Ovanesyan; L Christopher Mimun; Gangadharan Ajith Kumar; Brian G Yust; Chamath Dannangoda; Karen S Martirosyan; Dhiraj K Sardar
Journal:  ACS Appl Mater Interfaces       Date:  2015-09-10       Impact factor: 9.229

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