Literature DB >> 19584949

Nanopore with Transverse Nanoelectrodes for Electrical Characterization and Sequencing of DNA.

Brian C Gierhart1, David G Howitt, Shiahn J Chen, Zhineng Zhu, David E Kotecki, Rosemary L Smith, Scott D Collins.   

Abstract

A DNA sequencing device which integrates transverse conducting electrodes for the measurement of electrode currents during DNA translocation through a nanopore has been nanofabricated and characterized. A focused electron beam (FEB) milling technique, capable of creating features on the order of 1 nm in diameter, was used to create the nanopore. The device was characterized electrically using gold nanoparticles as an artificial analyte with both DC and AC measurement methods. Single nanoparticle/electrode interaction events were recorded. A low-noise, high-speed transimpedance current amplifier for the detection of nano to picoampere currents at microsecond time scales was designed, fabricated and tested for future integration with the nanopore device.

Year:  2008        PMID: 19584949      PMCID: PMC2706128          DOI: 10.1016/j.snb.2007.11.054

Source DB:  PubMed          Journal:  Sens Actuators B Chem        ISSN: 0925-4005            Impact factor:   7.460


  16 in total

1.  Ion-beam sculpting at nanometre length scales.

Authors:  J Li; D Stein; C McMullan; D Branton; M J Aziz; J A Golovchenko
Journal:  Nature       Date:  2001-07-12       Impact factor: 49.962

2.  Fabrication of solid-state nanopores with single-nanometre precision.

Authors:  A J Storm; J H Chen; X S Ling; H W Zandbergen; C Dekker
Journal:  Nat Mater       Date:  2003-08       Impact factor: 43.841

3.  Probing BSA binding to citrate-coated gold nanoparticles and surfaces.

Authors:  Scott H Brewer; Wilhelm R Glomm; Marcus C Johnson; Magne K Knag; Stefan Franzen
Journal:  Langmuir       Date:  2005-09-27       Impact factor: 3.882

4.  Slowing DNA translocation in a solid-state nanopore.

Authors:  Daniel Fologea; James Uplinger; Brian Thomas; David S McNabb; Jiali Li
Journal:  Nano Lett       Date:  2005-09       Impact factor: 11.189

5.  First-principles transversal DNA conductance deconstructed.

Authors:  X-G Zhang; Predrag S Krstić; Radomir Zikić; Jack C Wells; Miguel Fuentes-Cabrera
Journal:  Biophys J       Date:  2006-05-05       Impact factor: 4.033

6.  Frequency dependence of gold nanoparticle superassembly by dielectrophoresis.

Authors:  Brian C Gierhart; David G Howitt; Shiahn J Chen; Rosemary L Smith; Scott D Collins
Journal:  Langmuir       Date:  2007-10-27       Impact factor: 3.882

Review 7.  Solid-state nanopores.

Authors:  Cees Dekker
Journal:  Nat Nanotechnol       Date:  2007-03-04       Impact factor: 39.213

8.  Atomic-scale imaging of DNA using scanning tunnelling microscopy.

Authors:  R J Driscoll; M G Youngquist; J D Baldeschwieler
Journal:  Nature       Date:  1990-07-19       Impact factor: 49.962

9.  Characterization of individual polynucleotide molecules using a membrane channel.

Authors:  J J Kasianowicz; E Brandin; D Branton; D W Deamer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-26       Impact factor: 11.205

10.  Spectroscopy of biological compounds with inelastic electron tunneling.

Authors:  P K Hansma; R V Coleman
Journal:  Science       Date:  1974-06-28       Impact factor: 47.728

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  18 in total

1.  Synchronous optical and electrical detection of biomolecules traversing through solid-state nanopores.

Authors:  Gautam V Soni; Alon Singer; Zhiliang Yu; Yingjie Sun; Ben McNally; Amit Meller
Journal:  Rev Sci Instrum       Date:  2010-01       Impact factor: 1.523

2.  Electrochemical tunnelling sensors and their potential applications.

Authors:  T Albrecht
Journal:  Nat Commun       Date:  2012-05-08       Impact factor: 14.919

3.  Single nanopore transport of synthetic and biological polyelectrolytes in three-dimensional hybrid microfluidicnanofluidic devices.

Authors:  Travis L King; Enid N Gatimu; Paul W Bohn
Journal:  Biomicrofluidics       Date:  2009-01-02       Impact factor: 2.800

4.  Effect of noise on DNA sequencing via transverse electronic transport.

Authors:  Matt Krems; Michael Zwolak; Yuriy V Pershin; Massimiliano Di Ventra
Journal:  Biophys J       Date:  2009-10-07       Impact factor: 4.033

5.  Tandem array of nanoelectronic readers embedded coplanar to a fluidic nanochannel for correlated single biopolymer analysis.

Authors:  Leonardo Lesser-Rojas; K K Sriram; Kuo-Tang Liao; Shui-Chin Lai; Pai-Chia Kuo; Ming-Lee Chu; Chia-Fu Chou
Journal:  Biomicrofluidics       Date:  2014-01-10       Impact factor: 2.800

6.  Controlled translocation of individual DNA molecules through protein nanopores with engineered molecular brakes.

Authors:  Marcela Rincon-Restrepo; Ellina Mikhailova; Hagan Bayley; Giovanni Maglia
Journal:  Nano Lett       Date:  2011-01-11       Impact factor: 11.189

Review 7.  Molecular diagnostics for personal medicine using a nanopore.

Authors:  Utkur M Mirsaidov; Deqiang Wang; Winston Timp; Gregory Timp
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2010 Jul-Aug

8.  Single cell electric impedance topography: mapping membrane capacitance.

Authors:  Sameera Dharia; Harold E Ayliffe; Richard D Rabbitt
Journal:  Lab Chip       Date:  2009-09-18       Impact factor: 6.799

9.  Resistive Pulse Analysis of Microgel Deformation During Nanopore Translocation.

Authors:  Deric A Holden; Grant Hendrickson; L Andrew Lyon; Henry S White
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2011-01-27       Impact factor: 4.126

10.  Insights into electron tunneling across hydrogen-bonded base-pairs in complete molecular circuits for single-stranded DNA sequencing.

Authors:  Myeong H Lee; Otto F Sankey
Journal:  J Phys Condens Matter       Date:  2009-01-21       Impact factor: 2.333

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