Literature DB >> 19581957

Localization of a fluorescent source without numerical fitting.

Sean B Andersson1.   

Abstract

We present an algebraic solution to the problem of localizing a single fluorescent particle with sub-diffraction-limit accuracy. The algorithm is derived and its performance studied experimentally. Isolated 20 nm fluorescent beads were imaged using a wide-field microscope at two different positions separated by 100 nm and at a range of signal-to-noise ratios (SNR). The data were analyzed using both the new algorithm and the standard approach of fitting the data to a Gaussian profile. Results indicate that the proposed approach is nearly as accurate as Gaussian fitting across a wide range of SNR while executing over 200 times faster. In addition, the new algorithm is able to localize at lower SNR than the fitting method.

Mesh:

Year:  2008        PMID: 19581957     DOI: 10.1364/oe.16.018714

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  15 in total

1.  Rapid, accurate particle tracking by calculation of radial symmetry centers.

Authors:  Raghuveer Parthasarathy
Journal:  Nat Methods       Date:  2012-06-10       Impact factor: 28.547

2.  Faster and more versatile tools for super-resolution fluorescence microscopy.

Authors:  Alex Small
Journal:  Nat Methods       Date:  2012-06-28       Impact factor: 28.547

3.  Online image analysis software for photoactivation localization microscopy.

Authors:  Per Niklas Hedde; Jochen Fuchs; Franz Oswald; Jörg Wiedenmann; Gerd Ulrich Nienhaus
Journal:  Nat Methods       Date:  2009-10       Impact factor: 28.547

4.  Quantitative evaluation of software packages for single-molecule localization microscopy.

Authors:  Daniel Sage; Hagai Kirshner; Thomas Pengo; Nico Stuurman; Junhong Min; Suliana Manley; Michael Unser
Journal:  Nat Methods       Date:  2015-06-15       Impact factor: 28.547

5.  Single-pixel interior filling function approach for detecting and correcting errors in particle tracking.

Authors:  Stanislav Burov; Patrick Figliozzi; Binhua Lin; Stuart A Rice; Norbert F Scherer; Aaron R Dinner
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-27       Impact factor: 11.205

6.  Tracking single fluorescent particles in three dimensions via extremum seeking.

Authors:  Trevor T Ashley; Eric L Gan; Jane Pan; Sean B Andersson
Journal:  Biomed Opt Express       Date:  2016-08-10       Impact factor: 3.732

Review 7.  Optical imaging of nanoscale cellular structures.

Authors:  Per Niklas Hedde; Gerd Ulrich Nienhaus
Journal:  Biophys Rev       Date:  2010-09-08

Review 8.  Fluorophore localization algorithms for super-resolution microscopy.

Authors:  Alex Small; Shane Stahlheber
Journal:  Nat Methods       Date:  2014-03       Impact factor: 28.547

Review 9.  Fluorescence nanoscopy. Methods and applications.

Authors:  Jose Requejo-Isidro
Journal:  J Chem Biol       Date:  2013-06-04

10.  SimpleSTORM: a fast, self-calibrating reconstruction algorithm for localization microscopy.

Authors:  Ullrich Köthe; Frank Herrmannsdörfer; Ilia Kats; Fred A Hamprecht
Journal:  Histochem Cell Biol       Date:  2014-04-11       Impact factor: 4.304

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