Literature DB >> 19570793

Fluorescence two-dimensional difference gel electrophoresis for biomaterial applications.

Laura E McNamara1, Matthew J Dalby, Mathis O Riehle, Richard Burchmore.   

Abstract

Fluorescence two-dimensional difference gel electrophoresis (DiGE) is rapidly becoming established as a powerful technique for the characterization of differences in protein expression levels between two or more conditions. In this review, we consider the application of DiGE-both minimal and saturation labelling-to biomaterials research, considering the challenges and rewards of this approach.

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Year:  2009        PMID： 19570793      PMCID： PMC2843984          DOI： 10.1098/rsif.2009.0177.focus

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN： 1742-5662            Impact factor:   4.118


  48 in total

Review 1.  Protein microarray technology.

Authors:  Markus F Templin; Dieter Stoll; Monika Schrenk; Petra C Traub; Christian F Vöhringer; Thomas O Joos
Journal:  Trends Biotechnol       Date:  2002-04       Impact factor: 19.536

2.  Accurate qualitative and quantitative proteomic analysis of clinical hepatocellular carcinoma using laser capture microdissection coupled with isotope-coded affinity tag and two-dimensional liquid chromatography mass spectrometry.

Authors:  Chen Li; Yi Hong; Ye-Xiong Tan; Hu Zhou; Jian-Hua Ai; Su-Jun Li; Lei Zhang; Qi-Chang Xia; Jia-Rui Wu; Hong-Yang Wang; Rong Zeng
Journal:  Mol Cell Proteomics       Date:  2004-01-15       Impact factor: 5.911

Review 3.  The ABC's (and XYZ's) of peptide sequencing.

Authors:  Hanno Steen; Matthias Mann
Journal:  Nat Rev Mol Cell Biol       Date:  2004-09       Impact factor: 94.444

4.  Protein labeling by iTRAQ: a new tool for quantitative mass spectrometry in proteome research.

Authors:  Sebastian Wiese; Kai A Reidegeld; Helmut E Meyer; Bettina Warscheid
Journal:  Proteomics       Date:  2007-02       Impact factor: 3.984

5.  Comparative study of three proteomic quantitative methods, DIGE, cICAT, and iTRAQ, using 2D gel- or LC-MALDI TOF/TOF.

Authors:  Wells W Wu; Guanghui Wang; Seung Joon Baek; Rong-Fong Shen
Journal:  J Proteome Res       Date:  2006-03       Impact factor: 4.466

6.  MicroRNAs direct rapid deadenylation of mRNA.

Authors:  Ligang Wu; Jihua Fan; Joel G Belasco
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-22       Impact factor: 11.205

7.  The optimization of protocols for proteome difference gel electrophoresis (DiGE) analysis of preneoplastic skin.

Authors:  Adele Hannigan; Richard Burchmore; Joanna B Wilson
Journal:  J Proteome Res       Date:  2007-08-14       Impact factor: 4.466

8.  2D differential in-gel electrophoresis for the identification of esophageal scans cell cancer-specific protein markers.

Authors:  Ge Zhou; Hongmei Li; Dianne DeCamp; She Chen; Hongjun Shu; Yi Gong; Michael Flaig; John W Gillespie; Nan Hu; Philip R Taylor; Michael R Emmert-Buck; Lance A Liotta; Emanuel F Petricoin; Yingming Zhao
Journal:  Mol Cell Proteomics       Date:  2002-02       Impact factor: 5.911

9.  Experimental and statistical considerations to avoid false conclusions in proteomics studies using differential in-gel electrophoresis.

Authors:  Natasha A Karp; Paul S McCormick; Matthew R Russell; Kathryn S Lilley
Journal:  Mol Cell Proteomics       Date:  2007-05-17       Impact factor: 5.911

10.  Design and analysis issues in quantitative proteomics studies.

Authors:  Natasha A Karp; Kathryn S Lilley
Journal:  Proteomics       Date:  2007-09       Impact factor: 3.984
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  8 in total

1.  Human plasma protein adsorption onto dextranized surfaces: a two-dimensional electrophoresis and mass spectrometry study.

Authors:  Irene Y Tsai; Nancy Tomczyk; Joshua I Eckmann; Russell J Composto; David M Eckmann
Journal:  Colloids Surf B Biointerfaces       Date:  2011-01-12       Impact factor: 5.268

2.  NanoBioInterface: a multidisciplinary challenge.

Authors:  C James Kirkpatrick; William Bonfield
Journal:  J R Soc Interface       Date:  2009-12-02       Impact factor: 4.118

3.  Differential proteomics of Helicobacter pylori associated with autoimmune atrophic gastritis.

Authors:  Ombretta Repetto; Stefania Zanussi; Mariateresa Casarotto; Vincenzo Canzonieri; Paolo De Paoli; Renato Cannizzaro; Valli De Re
Journal:  Mol Med       Date:  2014-02-28       Impact factor: 6.354

Review 4.  Metabolomics: a valuable tool for stem cell monitoring in regenerative medicine.

Authors:  Laura E McNamara; Terje Sjöström; R M Dominic Meek; Richard O C Oreffo; Bo Su; Matthew J Dalby; Karl E V Burgess
Journal:  J R Soc Interface       Date:  2012-05-23       Impact factor: 4.118

5.  Clinical and technical phosphoproteomic research.

Authors:  Elena López; Isabel López; Antonio Ferreira; Julia Sequí
Journal:  Proteome Sci       Date:  2011-06-02       Impact factor: 2.480

6.  Nanotopographical control of stem cell differentiation.

Authors:  Laura E McNamara; Rebecca J McMurray; Manus J P Biggs; Fahsai Kantawong; Richard O C Oreffo; Matthew J Dalby
Journal:  J Tissue Eng       Date:  2010-08-18       Impact factor: 7.813

7.  Differential protein expression profile in the hypothalamic GT1-7 cell line after exposure to anabolic androgenic steroids.

Authors:  Freddyson J Martínez-Rivera; Juliana Pérez-Laspiur; María E Santiago-Gascot; Abner G Alemán-Reyes; Emanuel García-Santiago; Yolanda Rodríguez-Pérez; Cristhian Calo-Guadalupe; Inelia Otero-Pagán; Roxsana N Ayala-Pagán; Magdiel Martínez; Yisel M Cantres-Rosario; Loyda M Meléndez; Jennifer L Barreto-Estrada
Journal:  PLoS One       Date:  2017-07-18       Impact factor: 3.240

Review 8.  Beyond the Extracellular Vesicles: Technical Hurdles, Achieved Goals and Current Challenges When Working on Adipose Cells.

Authors:  María Gómez-Serrano; Viviane Ponath; Christian Preußer; Elke Pogge von Strandmann
Journal:  Int J Mol Sci       Date:  2021-03-25       Impact factor: 5.923
  8 in total

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