Literature DB >> 1956788

Alignment of Sfi I sites with the Not I restriction map of Schizosaccharomyces pombe genome.

J B Fan1, D Grothues, C L Smith.   

Abstract

A Sfi I restriction map of the fission yeast Schizosaccharomyces pombe genome was aligned with the Not I restriction map. There are 16 Sfi I sites in the S. pombe genome. Three Sfi I sites are on chromosome III which is devoid of Not I sites. The sizes of the entire genome and individual chromosomes, calculated from the Sfi I fragment sizes, are consistent with that calculated from the Not I fragment sizes. The Sfi I map provides greater physical characterization of the S. pombe genome and further validates the use of S. pombe chromosomal DNA as size standard. These maps have allowed detection of polymorphism on all three chromosomes.

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Year:  1991        PMID: 1956788      PMCID: PMC329141          DOI: 10.1093/nar/19.22.6289

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  15 in total

1.  High-resolution separation and accurate size determination in pulsed-field gel electrophoresis of DNA. 1. DNA size standards and the effect of agarose and temperature.

Authors:  M K Mathew; C L Smith; C R Cantor
Journal:  Biochemistry       Date:  1988-12-27       Impact factor: 3.162

2.  Construction of a Not I restriction map of the fission yeast Schizosaccharomyces pombe genome.

Authors:  J B Fan; Y Chikashige; C L Smith; O Niwa; M Yanagida; C R Cantor
Journal:  Nucleic Acids Res       Date:  1989-04-11       Impact factor: 16.971

3.  "A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum.

Authors:  A P Feinberg; B Vogelstein
Journal:  Anal Biochem       Date:  1984-02       Impact factor: 3.365

Review 4.  Genetic nomenclature and gene list of the fission yeast Schizosaccharomyces pombe.

Authors:  J Kohli
Journal:  Curr Genet       Date:  1987       Impact factor: 3.886

5.  DNA topoisomerase II is required for condensation and separation of mitotic chromosomes in S. pombe.

Authors:  T Uemura; H Ohkura; Y Adachi; K Morino; K Shiozaki; M Yanagida
Journal:  Cell       Date:  1987-09-11       Impact factor: 41.582

6.  Molecular genetic analysis of fission yeast Schizosaccharomyces pombe.

Authors:  S Moreno; A Klar; P Nurse
Journal:  Methods Enzymol       Date:  1991       Impact factor: 1.600

7.  A fission yeast chromosome can replicate autonomously in mouse cells.

Authors:  R C Allshire; G Cranston; J R Gosden; J C Maule; N D Hastie; P A Fantes
Journal:  Cell       Date:  1987-07-31       Impact factor: 41.582

8.  The 5.8S RNA gene sequence and the ribosomal repeat of Schizosaccharomyces pombe.

Authors:  J Schaak; J Mao; D Söll
Journal:  Nucleic Acids Res       Date:  1982-05-11       Impact factor: 16.971

9.  An electrophoretic karyotype for Schizosaccharomyces pombe by pulsed field gel electrophoresis.

Authors:  C L Smith; T Matsumoto; O Niwa; S Klco; J B Fan; M Yanagida; C R Cantor
Journal:  Nucleic Acids Res       Date:  1987-06-11       Impact factor: 16.971

10.  Construction of functional artificial minichromosomes in the fission yeast Schizosaccharomyces pombe.

Authors:  K M Hahnenberger; M P Baum; C M Polizzi; J Carbon; L Clarke
Journal:  Proc Natl Acad Sci U S A       Date:  1989-01       Impact factor: 11.205

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  15 in total

1.  Mismatch repair in Schizosaccharomyces pombe requires the mutL homologous gene pms1: molecular cloning and functional analysis.

Authors:  P Schär; M Baur; C Schneider; J Kohli
Journal:  Genetics       Date:  1997-08       Impact factor: 4.562

2.  Effects of genome position and the DNA damage checkpoint on the structure and frequency of sod2 gene amplification in fission yeast.

Authors:  T E Patterson; E B Albrecht; P Nurse; S Sazer; G R Stark
Journal:  Mol Biol Cell       Date:  1999-07       Impact factor: 4.138

3.  Top-down construction of an ordered Schizosaccharomyces pombe cosmid library.

Authors:  D Grothues; C R Cantor; C L Smith
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-10       Impact factor: 11.205

4.  M26 recombinational hotspot and physical conversion tract analysis in the ade6 gene of Schizosaccharomyces pombe.

Authors:  C Grimm; J Bähler; J Kohli
Journal:  Genetics       Date:  1994-01       Impact factor: 4.562

5.  Physical mapping of origins of replication in the fission yeast Schizosaccharomyces pombe.

Authors:  J G Wohlgemuth; G H Bulboaca; M Moghadam; M S Caddle; M P Calos
Journal:  Mol Biol Cell       Date:  1994-08       Impact factor: 4.138

6.  An analysis of interference in the fission yeast Schizosaccharomyces pombe.

Authors:  P Munz
Journal:  Genetics       Date:  1994-07       Impact factor: 4.562

7.  Effective long range mapping in Schizosaccharomyces pombe with the help of swi5.

Authors:  H Schmidt
Journal:  Curr Genet       Date:  1993-09       Impact factor: 3.886

8.  Detection and characterization of a ring chromosome in the fission yeast Schizosaccharomyces pombe.

Authors:  J B Fan; M Rochet; C Gaillardin; C L Smith
Journal:  Nucleic Acids Res       Date:  1992-11-25       Impact factor: 16.971

Review 9.  Homologous recombination in fission yeast: absence of crossover interference and synaptonemal complex.

Authors:  J Kohli; J Bähler
Journal:  Experientia       Date:  1994-03-15

10.  Hot spots of recombination in fission yeast: inactivation of the M26 hot spot by deletion of the ade6 promoter and the novel hotspot ura4-aim.

Authors:  M Zahn-Zabal; E Lehmann; J Kohli
Journal:  Genetics       Date:  1995-06       Impact factor: 4.562

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