Literature DB >> 19566427

A thermodynamic basis for prebiotic amino acid synthesis and the nature of the first genetic code.

Paul G Higgs1, Ralph E Pudritz.   

Abstract

Of the 20 amino acids used in proteins, 10 were formed in Miller's atmospheric discharge experiments. The two other major proposed sources of prebiotic amino acid synthesis include formation in hydrothermal vents and delivery to Earth via meteorites. We combine observational and experimental data of amino acid frequencies formed by these diverse mechanisms and show that, regardless of the source, these 10 early amino acids can be ranked in order of decreasing abundance in prebiotic contexts. This order can be predicted by thermodynamics. The relative abundances of the early amino acids were most likely reflected in the composition of the first proteins at the time the genetic code originated. The remaining amino acids were incorporated into proteins after pathways for their biochemical synthesis evolved. This is consistent with theories of the evolution of the genetic code by stepwise addition of new amino acids. These are hints that key aspects of early biochemistry may be universal.

Mesh:

Substances:

Year:  2009        PMID: 19566427     DOI: 10.1089/ast.2008.0280

Source DB:  PubMed          Journal:  Astrobiology        ISSN: 1557-8070            Impact factor:   4.335


  53 in total

1.  The role of carbohydrates at the origin of homochirality in biosystems.

Authors:  Søren Toxvaerd
Journal:  Orig Life Evol Biosph       Date:  2013-08-31       Impact factor: 1.950

2.  A realistic model under which the genetic code is optimal.

Authors:  Harry Buhrman; Peter T S van der Gulik; Gunnar W Klau; Christian Schaffner; Dave Speijer; Leen Stougie
Journal:  J Mol Evol       Date:  2013-07-23       Impact factor: 2.395

3.  The origin of the genetic code: matter of metabolism or physicochemical determinism?

Authors:  Massimo Di Giulio
Journal:  J Mol Evol       Date:  2013-10-26       Impact factor: 2.395

Review 4.  Pathways of Genetic Code Evolution in Ancient and Modern Organisms.

Authors:  Supratim Sengupta; Paul G Higgs
Journal:  J Mol Evol       Date:  2015-06-09       Impact factor: 2.395

5.  A Model for the Origin of the First mRNAs.

Authors:  Massimo Di Giulio
Journal:  J Mol Evol       Date:  2015-07-24       Impact factor: 2.395

Review 6.  Understanding the Genetic Code.

Authors:  Milton H Saier
Journal:  J Bacteriol       Date:  2019-07-10       Impact factor: 3.490

7.  Predicting Thermodynamic Behaviors of Non-Protein Amino Acids as a Function of Temperature and pH.

Authors:  Norio Kitadai
Journal:  Orig Life Evol Biosph       Date:  2015-08-19       Impact factor: 1.950

8.  The evolution and functional repertoire of translation proteins following the origin of life.

Authors:  Aaron D Goldman; Ram Samudrala; John A Baross
Journal:  Biol Direct       Date:  2010-04-08       Impact factor: 4.540

9.  Economical evolution: microbes reduce the synthetic cost of extracellular proteins.

Authors:  Daniel R Smith; Matthew R Chapman
Journal:  MBio       Date:  2010-08-24       Impact factor: 7.867

10.  Exceptional error minimization in putative primordial genetic codes.

Authors:  Artem S Novozhilov; Eugene V Koonin
Journal:  Biol Direct       Date:  2009-11-19       Impact factor: 4.540

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.