Literature DB >> 19548668

Identification, characterization, and bioconversion of a new intermediate in valanimycin biosynthesis.

Ram P Garg1, Lawrence B Alemany, Sean Moran, Ronald J Parry.   

Abstract

The antibiotic valanimycin is a naturally occurring azoxy compound isolated from Streptomyces viridifaciens. Detailed investigations have shown that valanimycin is derived from L-valine and L-serine via the intermediacy of O-(L-seryl)isobutylhydroxylamine. Sequence analysis of the valanimycin biosynthetic genes provides relatively few clues concerning the nature of the later stages of the pathway. Two exceptions are provided by the vlmJ and vlmK genes. The translation product of vlmJ exhibits similarity to diacylglycerol kinases, while the translation product of vlmK exhibits a weak similarity to the MmgE/PrpD superfamily of proteins. This superfamily includes 2-methylcitrate dehydratase. This communication describes the isolation and structure elucidation of valanimycin hydrate from vlmJ and vlmK mutants of S. viridifaciens. Additional studies have shown that the conversion of valanimycin hydrate into valanimycin by S. viridifaciens requires both the vlmJ and vlmK genes and that VlmJ catalyzes the ATP-dependent phosphorylation of the hydroxyl group of valanimycin hydrate prior to VlmK-catalyzed dehydration.

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Year:  2009        PMID: 19548668      PMCID: PMC2726733          DOI: 10.1021/ja901243p

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  10 in total

1.  A novel valanimycin-resistance determinant (vlmF) from Streptomyces viridifaciens MG456-hF10.

Authors:  Y Ma; J Patel; R J Parry
Journal:  Microbiology       Date:  2000-02       Impact factor: 2.777

2.  Molecular characterization and analysis of the biosynthetic gene cluster for the azoxy antibiotic valanimycin.

Authors:  Ram P Garg; Yunqing Ma; Jeffrey C Hoyt; Ronald J Parry
Journal:  Mol Microbiol       Date:  2002-10       Impact factor: 3.501

3.  Biosynthesis of valanimycin.

Authors:  M Yamato; T Takeuchi; H Umezawa; N Sakata; H Hayashi; M Hori
Journal:  J Antibiot (Tokyo)       Date:  1986-09       Impact factor: 2.649

4.  Purification and characterization of isobutylamine N-hydroxylase from the valanimycin producer Streptomyces viridifaciens MG456-hF10.

Authors:  R J Parry; W Li
Journal:  Arch Biochem Biophys       Date:  1997-03-01       Impact factor: 4.013

5.  Biochemical characterization of VlmL, a Seryl-tRNA synthetase encoded by the valanimycin biosynthetic gene cluster.

Authors:  Ram P Garg; Jose M Gonzalez; Ronald J Parry
Journal:  J Biol Chem       Date:  2006-07-20       Impact factor: 5.157

6.  An NADPH:FAD oxidoreductase from the valanimycin producer, Streptomyces viridifaciens. Cloning, analysis, and overexpression.

Authors:  R J Parry; W Li
Journal:  J Biol Chem       Date:  1997-09-12       Impact factor: 5.157

7.  Cloning, analysis, and overexpression of the gene encoding isobutylamine N-hydroxylase from the valanimycin producer, Streptomyces viridifaciens.

Authors:  R J Parry; W Li; H N Cooper
Journal:  J Bacteriol       Date:  1997-01       Impact factor: 3.490

8.  Investigations of valanimycin biosynthesis: elucidation of the role of seryl-tRNA.

Authors:  Ram P Garg; Xuelei L Qian; Lawrence B Alemany; Sean Moran; Ronald J Parry
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-01       Impact factor: 11.205

9.  Mechanistic investigations of the dehydration reaction of lacticin 481 synthetase using site-directed mutagenesis.

Authors:  Young Ok You; Wilfred A van der Donk
Journal:  Biochemistry       Date:  2007-04-25       Impact factor: 3.162

10.  Isolation and properties of valanimycin, a new azoxy antibiotic.

Authors:  M Yamato; H Iinuma; H Naganawa; Y Yamagishi; M Hamada; T Masuda; H Umezawa; V Abe; M Hori
Journal:  J Antibiot (Tokyo)       Date:  1986-02       Impact factor: 2.649

  10 in total
  9 in total

Review 1.  Heteroatom-Heteroatom Bond Formation in Natural Product Biosynthesis.

Authors:  Abraham J Waldman; Tai L Ng; Peng Wang; Emily P Balskus
Journal:  Chem Rev       Date:  2017-04-04       Impact factor: 60.622

Review 2.  tRNA as an active chemical scaffold for diverse chemical transformations.

Authors:  Christopher S Francklyn; Anand Minajigi
Journal:  FEBS Lett       Date:  2010-01-21       Impact factor: 4.124

3.  Revisiting the biosynthesis of dehydrophos reveals a tRNA-dependent pathway.

Authors:  Despina J Bougioukou; Subha Mukherjee; Wilfred A van der Donk
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-17       Impact factor: 11.205

4.  Regulation of valanimycin biosynthesis in Streptomyces viridifaciens: characterization of VlmI as a Streptomyces antibiotic regulatory protein (SARP).

Authors:  Ram P Garg; Ronald J Parry
Journal:  Microbiology (Reading)       Date:  2009-11-05       Impact factor: 2.777

5.  Use of the University of Minnesota Biocatalysis/Biodegradation Database for study of microbial degradation.

Authors:  Lynda Bm Ellis; Lawrence P Wackett
Journal:  Microb Inform Exp       Date:  2012-01-04

6.  Use of a phosphonate methyltransferase in the identification of the fosfazinomycin biosynthetic gene cluster.

Authors:  Jiangtao Gao; Kou-San Ju; Xiaomin Yu; Juan E Velásquez; Subha Mukherjee; Jaeheon Lee; Changming Zhao; Bradley S Evans; James R Doroghazi; William W Metcalf; Wilfred A van der Donk
Journal:  Angew Chem Int Ed Engl       Date:  2013-12-27       Impact factor: 15.336

7.  New Insights into the Biosynthesis of Fosfazinomycin.

Authors:  Zedu Huang; Kwo-Kwang Abraham Wang; Wilfred A van der Donk
Journal:  Chem Sci       Date:  2016-05-06       Impact factor: 9.825

Review 8.  Flavin-dependent N-hydroxylating enzymes: distribution and application.

Authors:  Carolin Mügge; Thomas Heine; Alvaro Gomez Baraibar; Willem J H van Berkel; Caroline E Paul; Dirk Tischler
Journal:  Appl Microbiol Biotechnol       Date:  2020-06-05       Impact factor: 4.813

9.  New azodyrecins identified by a genome mining-directed reactivity-based screening.

Authors:  Atina Rizkiya Choirunnisa; Kuga Arima; Yo Abe; Noritaka Kagaya; Kei Kudo; Hikaru Suenaga; Junko Hashimoto; Manabu Fujie; Noriyuki Satoh; Kazuo Shin-Ya; Kenichi Matsuda; Toshiyuki Wakimoto
Journal:  Beilstein J Org Chem       Date:  2022-08-10       Impact factor: 2.544

  9 in total

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