Literature DB >> 19542887

Genetic dissection of the mouse CNS using magnetic resonance microscopy.

Alexandra Badea1, G Allan Johnson, Robert W Williams.   

Abstract

PURPOSE OF REVIEW: Advances in magnetic resonance microscopy (MRM) make it practical to map gene variants responsible for structural variation in brains of many species, including mice and humans. We review results of a systematic genetic analysis of MRM data using as a case study a family of well characterized lines of mice. RECENT ADVANCES: MRM has matured to the point that we can generate high contrast, high-resolution images even for species as small as a mouse, with a brain merely 1/3000th the size of humans. We generated 21.5-micron data sets for a diverse panel of BXD mouse strains to gauge the extent of genetic variation, and as a prelude to comprehensive genetic and genomic analyses. Here we review MRM capabilities and image segmentation methods; heritability of brain variation; covariation of the sizes of brain regions; and correlations between MRM and classical histological data sets.
SUMMARY: The combination of high throughput MRM and genomics will improve our understanding of the genetic basis of structure-function correlations. Sophisticated mouse models will be critical in converting correlations into mechanisms and in determining genetic and epigenetic causes of differences in disease susceptibility.

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Year:  2009        PMID: 19542887      PMCID: PMC2734144          DOI: 10.1097/WCO.0b013e32832d9b86

Source DB:  PubMed          Journal:  Curr Opin Neurol        ISSN: 1350-7540            Impact factor:   5.710


  49 in total

1.  Genetic dissection of the olfactory bulbs of mice: QTLs on four chromosomes modulate bulb size.

Authors:  R W Williams; D C Airey; A Kulkarni; G Zhou; L Lu
Journal:  Behav Genet       Date:  2001-01       Impact factor: 2.805

2.  Anatomical phenotyping in the brain and skull of a mutant mouse by magnetic resonance imaging and computed tomography.

Authors:  Brian J Nieman; Ann M Flenniken; S Lee Adamson; R Mark Henkelman; John G Sled
Journal:  Physiol Genomics       Date:  2006-01-12       Impact factor: 3.107

3.  A three-dimensional digital atlas database of the adult C57BL/6J mouse brain by magnetic resonance microscopy.

Authors:  Y Ma; P R Hof; S C Grant; S J Blackband; R Bennett; L Slatest; M D McGuigan; H Benveniste
Journal:  Neuroscience       Date:  2005-09-13       Impact factor: 3.590

4.  Automated segmentation of mouse brain images using extended MRF.

Authors:  Min Hyeok Bae; Rong Pan; Teresa Wu; Alexandra Badea
Journal:  Neuroimage       Date:  2009-02-21       Impact factor: 6.556

5.  Genetic control of interconnected neuronal populations in the mouse primary visual system.

Authors:  Dave J Seecharan; Anand L Kulkarni; Lu Lu; Glenn D Rosen; Robert W Williams
Journal:  J Neurosci       Date:  2003-12-03       Impact factor: 6.167

6.  Genetics of brain fiber architecture and intellectual performance.

Authors:  Ming-Chang Chiang; Marina Barysheva; David W Shattuck; Agatha D Lee; Sarah K Madsen; Christina Avedissian; Andrea D Klunder; Arthur W Toga; Katie L McMahon; Greig I de Zubicaray; Margaret J Wright; Anuj Srivastava; Nikolay Balov; Paul M Thompson
Journal:  J Neurosci       Date:  2009-02-18       Impact factor: 6.167

7.  Morphometric analysis of the C57BL/6J mouse brain.

Authors:  A Badea; A A Ali-Sharief; G A Johnson
Journal:  Neuroimage       Date:  2007-06-07       Impact factor: 6.556

8.  Automated segmentation of the actively stained mouse brain using multi-spectral MR microscopy.

Authors:  Anjum A Sharief; Alexandra Badea; Anders M Dale; G Allan Johnson
Journal:  Neuroimage       Date:  2007-08-29       Impact factor: 6.556

9.  Voxel-based morphometry in the R6/2 transgenic mouse reveals differences between genotypes not seen with manual 2D morphometry.

Authors:  S J Sawiak; N I Wood; G B Williams; A J Morton; T A Carpenter
Journal:  Neurobiol Dis       Date:  2008-10-01       Impact factor: 5.996

10.  Use of magnetic resonance imaging for anatomical phenotyping of the R6/2 mouse model of Huntington's disease.

Authors:  S J Sawiak; N I Wood; G B Williams; A J Morton; T A Carpenter
Journal:  Neurobiol Dis       Date:  2008-10-01       Impact factor: 5.996

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  9 in total

Review 1.  3-dimensional imaging modalities for phenotyping genetically engineered mice.

Authors:  K A Powell; D Wilson
Journal:  Vet Pathol       Date:  2011-12-06       Impact factor: 2.221

2.  3D high spectral and spatial resolution imaging of ex vivo mouse brain.

Authors:  Sean Foxley; Miriam Domowicz; Gregory S Karczmar; Nancy Schwartz
Journal:  Med Phys       Date:  2015-03       Impact factor: 4.071

3.  Quantitative neuromorphometry using magnetic resonance histology.

Authors:  G Allan Johnson; Alexandra Badea; Yi Jiang
Journal:  Toxicol Pathol       Date:  2010-11-30       Impact factor: 1.902

Review 4.  Post-genomic behavioral genetics: From revolution to routine.

Authors:  D G Ashbrook; M K Mulligan; R W Williams
Journal:  Genes Brain Behav       Date:  2017-12-21       Impact factor: 3.449

5.  Identifying human disease genes through cross-species gene mapping of evolutionary conserved processes.

Authors:  Martin Poot; Alexandra Badea; Robert W Williams; Martien J Kas
Journal:  PLoS One       Date:  2011-05-04       Impact factor: 3.240

6.  Visualization of synaptic domains in the Drosophila brain by magnetic resonance microscopy at 10 micron isotropic resolution.

Authors:  Choong H Lee; Stephen J Blackband; Pedro Fernandez-Funez
Journal:  Sci Rep       Date:  2015-03-10       Impact factor: 4.379

7.  In vivo microscopic voxel-based morphometry with a brain template to characterize strain-specific structures in the mouse brain.

Authors:  Keigo Hikishima; Yuji Komaki; Fumiko Seki; Yasuyuki Ohnishi; Hirotaka J Okano; Hideyuki Okano
Journal:  Sci Rep       Date:  2017-03-07       Impact factor: 4.379

Review 8.  Recent Progress in Magnetic Resonance Imaging of the Embryonic and Neonatal Mouse Brain.

Authors:  Dan Wu; Jiangyang Zhang
Journal:  Front Neuroanat       Date:  2016-03-03       Impact factor: 3.856

9.  Microcephaly with altered cortical layering in GIT1 deficiency revealed by quantitative neuroimaging.

Authors:  Alexandra Badea; Robert Schmalzigaug; Woojoo Kim; Pamela Bonner; Umer Ahmed; G Allan Johnson; Gary Cofer; Mark Foster; Robert J Anderson; Cristian Badea; Richard T Premont
Journal:  Magn Reson Imaging       Date:  2020-09-30       Impact factor: 2.546

  9 in total

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