| Literature DB >> 19538744 |
Emilie Vierron1, Bruno Giraudeau.
Abstract
BACKGROUND: In a multicenter trial, responses for subjects belonging to a common center are correlated. Such a clustering is usually assessed through the design effect, defined as a ratio of two variances. The aim of this work was to describe and understand situations where the design effect involves a gain or a loss of power.Entities:
Mesh:
Year: 2009 PMID: 19538744 PMCID: PMC2715424 DOI: 10.1186/1471-2288-9-39
Source DB: PubMed Journal: BMC Med Res Methodol ISSN: 1471-2288 Impact factor: 4.615
One-way ANOVA for data distributed according to the two-way mixed-effects model (1).
| Source | DF | SS | E(MS) |
|---|---|---|---|
| Group | 2 - 1 | ||
| Residual | |||
| Total | |||
When data are distributed according to the mixed model (1) but analyzed by performing a one-way ANOVA – as if data were distributed according to model (4) – the expectation of the residual mean squares (denoted in the framework of model (4)) can actually be expressed as a function of and , the variance components associated to the true underlying statistical model (i.e. the mixed model (1)).
Validation of the approximate design effect formula.
| ICC = 0.01 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| N subjects | 100 | 200 | 500 | |||||||||
| N centers | 5 | 10 | 20 | 5 | 10 | 20 | 50 | 5 | 10 | 20 | 50 | 100 |
| S1 | 0.9969 | 0.9938 | 0.9921 | 0.9966 | 0.9936 | 0.9922 | 0.9911 | 0.9965 | 0.9933 | 0.9919 | 0.9913 | 0.9908 |
| 0.0065 | 0.0032 | 0.0016 | 0.0065 | 0.0032 | 0.0016 | 0.0006 | 0.0065 | 0.0032 | 0.0016 | 0.0006 | 0.0003 | |
| S2 | 0.9972 | 0.9949 | 0.9928 | 0.9972 | 0.9956 | 0.9938 | 0.9917 | 0.9980 | 0.9989 | 0.9956 | 0.9931 | 0.9918 |
| 0.0065 | 0.0032 | 0.0014 | 0.0065 | 0.0032 | 0.0016 | 0.0005 | 0.0065 | 0.0033 | 0.0016 | 0.0006 | 0.0003 | |
| S3 | 1.0102 | 1.0306 | 1.0147 | 1.0217 | 1.0622 | 1.0431 | 1.0132 | 1.0575 | 1.1788 | 1.1143 | 1.0487 | 1.0204 |
| 0.0066 | 0.0035 | 0.0016 | 0.0066 | 0.0036 | 0.0018 | 0.0006 | 0.0066 | 0.0036 | 0.0019 | 0.0007 | 0.0003 | |
| S4 | 1.1038 | 1.0323 | 1.0285 | 1.2026 | 1.0538 | 1.0604 | 1.0184 | 1.4788 | 1.1290 | 1.1588 | 1.0559 | 1.0186 |
| 0.0077 | 0.0051 | 0.0027 | 0.0077 | 0.0052 | 0.0030 | 0.0011 | 0.0077 | 0.0053 | 0.0030 | 0.0013 | 0.0006 | |
| ICC = 0.10 | ||||||||||||
| N subjects | 100 | 200 | 500 | |||||||||
| N centers | 5 | 10 | 20 | 5 | 10 | 20 | 50 | 5 | 10 | 20 | 50 | 100 |
| S1 | 0.9655 | 0.9356 | 0.9197 | 0.9642 | 0.9337 | 0.9209 | 0.9105 | 0.9631 | 0.9313 | 0.9177 | 0.9124 | 0.9076 |
| 0.0643 | 0.0318 | 0.0155 | 0.0649 | 0.0320 | 0.0160 | 0.0061 | 0.0649 | 0.0324 | 0.0161 | 0.0063 | 0.0031 | |
| S2 | 0.9709 | 0.9469 | 0.9269 | 0.9696 | 0.9547 | 0.9359 | 0.9171 | 0.9793 | 0.9827 | 0.9549 | 0.9300 | 0.9174 |
| 0.0656 | 0.0318 | 0.0142 | 0.0648 | 0.0323 | 0.0157 | 0.0053 | 0.0651 | 0.0325 | 0.0161 | 0.0063 | 0.0028 | |
| S3 | 1.1101 | 1.3018 | 1.1721 | 1.2095 | 1.6471 | 1.4256 | 1.1337 | 1.6662 | 2.7175 | 2.1685 | 1.4965 | 1.2049 |
| 0.0654 | 0.0349 | 0.0166 | 0.0659 | 0.0354 | 0.0182 | 0.0063 | 0.0662 | 0.0358 | 0.0185 | 0.0074 | 0.0034 | |
| S4 | 2.0718 | 1.3360 | 1.2725 | 3.1669 | 1.5750 | 1.6252 | 1.1934 | 6.2708 | 2.5759 | 2.5886 | 1.5687 | 1.2017 |
| 0.0768 | 0.0507 | 0.0272 | 0.0770 | 0.0517 | 0.0299 | 0.0110 | 0.0771 | 0.0513 | 0.0299 | 0.0126 | 0.0059 | |
ICC: Intraclass Correlation Coefficient
Simulations are conducted with varying center sizes: 20% of centers recruit 80% of subjects. Average exact design effect estimate (Deff) and average relative difference (rdiff) between exact and approximate design effect formula are given for 4 situations (Si, i = 1,2,3,4), two ICC values, and obtained for 1000 simulations.
S1: Equal group sizes. In each center, the probability, for a subject, to be in group 1 is 1/2
S2: Slight variations in group 1 proportions among centers. The ratio between the sizes of group 1 and group 2 varies uniformly between 0.8 and 1.25 among centers
S3: Important variations in group 1 proportions among centers. The ratio between the sizes of group 1 and group 2 varies uniformly between 0.1 and 10 among centers
S4: "Cluster design". The center is nested within the group and the probability, for each center, to be in group 1 is 1/2
Design effects calculations for three different group distributions among centers.
| Group distribution among centers | Quite homogeneous | Heterogeneous | Cluster design | ||||||
|---|---|---|---|---|---|---|---|---|---|
| %* | %* | %* | |||||||
| Center 1 (n = 57) | 16 | 41 | 11 | 46 | 0 | 57 | |||
| Center 2 (n = 38) | 10 | 28 | 24 | 14 | 38 | 0 | |||
| Center 3 (n = 44) | 11 | 33 | 7 | 37 | 0 | 44 | |||
| Center 4 (n = 15) | 3 | 12 | 1 | 14 | 0 | 15 | |||
| Center 5 (n = 41) | 9 | 32 | 8 | 33 | 0 | 41 | |||
| Center 6 (n = 19) | 5 | 14 | 10 | 9 | 19 | 0 | |||
| Center 7 (n = 37) | 8 | 29 | 9 | 28 | 0 | 37 | |||
| Center 8 (n = 52) | 12 | 40 | 4 | 48 | 0 | 52 | |||
| Center 9 (n = 12) | 3 | 9 | 1 | 11 | 0 | 12 | |||
| Center 10 (n = 28) | 8 | 20 | 10 | 18 | 28 | 0 | |||
| 0.14 | 5.79 | 33.77 | |||||||
*group 1 proportion in each center
The global proportion of subjects in group 1 is 25%, for each group distribution, and the Intraclass Correlation Coefficient is equal to 0.10.