Literature DB >> 19529834

AutoSherlock: a program for effective crystallization data analysis.

Raymond M Nagel, Joseph R Luft, Edward H Snell.   

Abstract

A program, AutoSherlock, has been developed to present crystallization screening results in terms of chemical space. This facilitates identification of lead conditions, rational interpretation of results and directions for the optimization of crystallization conditions.

Year:  2008        PMID： 19529834      PMCID： PMC2648629          DOI： 10.1107/S0021889808028938

Source DB:  PubMed          Journal:  J Appl Crystallogr        ISSN： 0021-8898            Impact factor:   3.304


  4 in total

Review 1.  A deliberate approach to screening for initial crystallization conditions of biological macromolecules.

Authors:  Joseph R Luft; Robert J Collins; Nancy A Fehrman; Angela M Lauricella; Christina K Veatch; George T DeTitta
Journal:  J Struct Biol       Date:  2003-04       Impact factor: 2.867

2.  SAmBA: an interactive software for optimizing the design of biological macromolecules crystallization experiments.

Authors:  S Audic; F Lopez; J M Claverie; O Poirot; C Abergel
Journal:  Proteins       Date:  1997-10

3.  Glycerol concentrations required for the successful vitrification of cocktail conditions in a high-throughput crystallization screen.

Authors:  Robin Kempkes; Elizabeth Stofko; Kam Lam; Edward H Snell
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2008-02-20

4.  The application and use of chemical space mapping to interpret crystallization screening results.

Authors:  Edward H Snell; Ray M Nagel; Ann Wojtaszcyk; Hugh O'Neill; Jennifer L Wolfley; Joseph R Luft
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2008-11-18
  4 in total
  8 in total

1.  Lessons from high-throughput protein crystallization screening: 10 years of practical experience.

Authors:  Joseph R Luft; Edward H Snell; George T Detitta
Journal:  Expert Opin Drug Discov       Date:  2011-03-22       Impact factor: 6.098

2.  What's in a drop? Correlating observations and outcomes to guide macromolecular crystallization experiments.

Authors:  Joseph R Luft; Jennifer R Wolfley; Edward H Snell
Journal:  Cryst Growth Des       Date:  2011-03-02       Impact factor: 4.076

3.  Protein crystallization analysis on the World Community Grid.

Authors:  Christian A Cumbaa; Igor Jurisica
Journal:  J Struct Funct Genomics       Date:  2010-01-14

4.  Structural basis for PECAM-1 homophilic binding.

Authors:  Cathy Paddock; Dongwen Zhou; Panida Lertkiatmongkol; Peter J Newman; Jieqing Zhu
Journal:  Blood       Date:  2015-12-23       Impact factor: 22.113

5.  Crystal cookery - using high-throughput technologies and the grocery store as a teaching tool.

Authors:  Joseph R Luft; Nicholas M Furlani; Rachel E Nemoyer; Elliott J Penna; Jennifer R Wolfley; M Elizabeth Snell; Stephen A Potter; Edward H Snell
Journal:  J Appl Crystallogr       Date:  2010-08-21       Impact factor: 3.304

6.  The application and use of chemical space mapping to interpret crystallization screening results.

Authors:  Edward H Snell; Ray M Nagel; Ann Wojtaszcyk; Hugh O'Neill; Jennifer L Wolfley; Joseph R Luft
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2008-11-18

7.  Comparing chemistry to outcome: the development of a chemical distance metric, coupled with clustering and hierarchal visualization applied to macromolecular crystallography.

Authors:  Andrew E Bruno; Amanda M Ruby; Joseph R Luft; Thomas D Grant; Jayaraman Seetharaman; Gaetano T Montelione; John F Hunt; Edward H Snell
Journal:  PLoS One       Date:  2014-06-27       Impact factor: 3.240

8.  Applications of the second virial coefficient: protein crystallization and solubility.

Authors:  William W Wilson; Lawrence J Delucas
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-04-30       Impact factor: 1.056
  8 in total

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