Literature DB >> 19529749

HIV-1 RNA dimerization: It takes two to tango.

Michael D Moore1, Wei Shau Hu.   

Abstract

Each viral particle of HIV-1, the infectious agent of AIDS, contains two copies of the full-length viral genomic RNA. Encapsidating two copies of genomic RNA is one of the characteristics of the retrovirus family. The two RNA molecules are both positive-sense and often identical; furthermore, each RNA encodes the full complement of genetic information required for viral replication. The two strands of RNA are intricately entwined within the core of the mature infectious virus as a ribonuclear complex with the viral proteins, including nucleocapsid. Multiple steps in the biogenesis of the genomic full-length RNA are involved in achieving this location and dimeric state. The viral sequences and proteins involved in the process of RNA dimerization, both for the initial interstrand contact and subsequent steps that result in the condensed, stable conformation of the genomic RNA, are outlined in this review. In addition, the impact of the dimeric state of HIV-1 viral RNA is discussed with respect to its importance in efficient viral replication and, consequently, the potential development of antiviral strategies designed to disrupt the formation of dimeric RNA.

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Year:  2009        PMID: 19529749      PMCID: PMC3056336     

Source DB:  PubMed          Journal:  AIDS Rev        ISSN: 1139-6121            Impact factor:   2.500


  111 in total

1.  Determinants of the human immunodeficiency virus type 1 p15NC-RNA interaction that affect enhanced cleavage by the viral protease.

Authors:  N Sheng; S C Pettit; R J Tritch; D H Ozturk; M M Rayner; R Swanstrom; S Erickson-Viitanen
Journal:  J Virol       Date:  1997-08       Impact factor: 5.103

2.  Ultrastructure of HIV-1 genomic RNA.

Authors:  S Höglund; A Ohagen; J Goncalves; A T Panganiban; D Gabuzda
Journal:  Virology       Date:  1997-07-07       Impact factor: 3.616

3.  Non-canonical interactions in a kissing loop complex: the dimerization initiation site of HIV-1 genomic RNA.

Authors:  J C Paillart; E Westhof; C Ehresmann; B Ehresmann; R Marquet
Journal:  J Mol Biol       Date:  1997-07-04       Impact factor: 5.469

4.  Position dependence of functional hairpins important for human immunodeficiency virus type 1 RNA encapsidation in vivo.

Authors:  M S McBride; A T Panganiban
Journal:  J Virol       Date:  1997-03       Impact factor: 5.103

5.  Partial inhibition of the human immunodeficiency virus type 1 protease results in aberrant virus assembly and the formation of noninfectious particles.

Authors:  A H Kaplan; J A Zack; M Knigge; D A Paul; D J Kempf; D W Norbeck; R Swanstrom
Journal:  J Virol       Date:  1993-07       Impact factor: 5.103

6.  HIV-1 genome dimerization: kissing-loop hairpin dictates whether nucleotides downstream of the 5' splice junction contribute to loose and tight dimerization of human immunodeficiency virus RNA.

Authors:  M Laughrea; L Jetté
Journal:  Biochemistry       Date:  1997-08-05       Impact factor: 3.162

7.  Human immunodeficiency virus type 1 RNA outside the primary encapsidation and dimer linkage region affects RNA dimer stability in vivo.

Authors:  J I Sakuragi; A T Panganiban
Journal:  J Virol       Date:  1997-04       Impact factor: 5.103

8.  A dual role of the putative RNA dimerization initiation site of human immunodeficiency virus type 1 in genomic RNA packaging and proviral DNA synthesis.

Authors:  J C Paillart; L Berthoux; M Ottmann; J L Darlix; R Marquet; B Ehresmann; C Ehresmann
Journal:  J Virol       Date:  1996-12       Impact factor: 5.103

9.  The importin-beta family member Crm1p bridges the interaction between Rev and the nuclear pore complex during nuclear export.

Authors:  M Neville; F Stutz; L Lee; L I Davis; M Rosbash
Journal:  Curr Biol       Date:  1997-10-01       Impact factor: 10.834

10.  Mutant human immunodeficiency virus type 1 genomes with defects in RNA dimerization or encapsidation.

Authors:  J L Clever; T G Parslow
Journal:  J Virol       Date:  1997-05       Impact factor: 5.103

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  64 in total

1.  A short sequence motif in the 5' leader of the HIV-1 genome modulates extended RNA dimer formation and virus replication.

Authors:  Nikki van Bel; Atze T Das; Marion Cornelissen; Truus E M Abbink; Ben Berkhout
Journal:  J Biol Chem       Date:  2014-11-03       Impact factor: 5.157

Review 2.  HIV-1 assembly, budding, and maturation.

Authors:  Wesley I Sundquist; Hans-Georg Kräusslich
Journal:  Cold Spring Harb Perspect Med       Date:  2012-07       Impact factor: 6.915

3.  Circularization of the HIV-1 genome facilitates strand transfer during reverse transcription.

Authors:  Nancy Beerens; Jørgen Kjems
Journal:  RNA       Date:  2010-04-29       Impact factor: 4.942

4.  Dimerization of the SP1 Region of HIV-1 Gag Induces a Helical Conformation and Association into Helical Bundles: Implications for Particle Assembly.

Authors:  Siddhartha A K Datta; Patrick K Clark; Lixin Fan; Buyong Ma; Demetria P Harvin; Raymond C Sowder; Ruth Nussinov; Yun-Xing Wang; Alan Rein
Journal:  J Virol       Date:  2015-12-04       Impact factor: 5.103

5.  Human T-cell leukemia virus type 1 Gag domains have distinct RNA-binding specificities with implications for RNA packaging and dimerization.

Authors:  Weixin Wu; Joshua Hatterschide; Yu-Ci Syu; William A Cantara; Ruth J Blower; Heather M Hanson; Louis M Mansky; Karin Musier-Forsyth
Journal:  J Biol Chem       Date:  2018-09-14       Impact factor: 5.157

Review 6.  How HIV-1 Gag assembles in cells: Putting together pieces of the puzzle.

Authors:  Jaisri R Lingappa; Jonathan C Reed; Motoko Tanaka; Kasana Chutiraka; Bridget A Robinson
Journal:  Virus Res       Date:  2014-07-24       Impact factor: 3.303

Review 7.  Diverse interactions of retroviral Gag proteins with RNAs.

Authors:  Alan Rein; Siddhartha A K Datta; Christopher P Jones; Karin Musier-Forsyth
Journal:  Trends Biochem Sci       Date:  2011-05-06       Impact factor: 13.807

Review 8.  Sexual dimorphism in HIV-1 infection.

Authors:  Anne Rechtien; Marcus Altfeld
Journal:  Semin Immunopathol       Date:  2018-10-01       Impact factor: 9.623

9.  Sequence-Independent Self-Assembly of Germ Granule mRNAs into Homotypic Clusters.

Authors:  Tatjana Trcek; Tyler E Douglas; Markus Grosch; Yandong Yin; Whitby V I Eagle; Elizabeth R Gavis; Hari Shroff; Eli Rothenberg; Ruth Lehmann
Journal:  Mol Cell       Date:  2020-05-27       Impact factor: 17.970

10.  Sequence requirements for localization and packaging of Ty3 retroelement RNA.

Authors:  Kristina Clemens; Virginia Bilanchone; Nadejda Beliakova-Bethell; Liza S Z Larsen; Kim Nguyen; Suzanne Sandmeyer
Journal:  Virus Res       Date:  2012-10-13       Impact factor: 3.303

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