Literature DB >> 19525950

Switchable self-protected attractions in DNA-functionalized colloids.

Mirjam E Leunissen1, Rémi Dreyfus, Fook Chiong Cheong, David G Grier, Roujie Sha, Nadrian C Seeman, Paul M Chaikin.   

Abstract

Surface functionalization with DNA is a powerful tool for guiding the self-assembly of nanometre- and micrometre-sized particles. Complementary 'sticky ends' form specific inter-particle links and reproducibly bind at low temperature and unbind at high temperature. Surprisingly, the ability of single-stranded DNA to form folded secondary structures has not been explored for controlling (nano) colloidal assembly processes, despite its frequent use in DNA nanotechnology. Here, we show how loop and hairpin formation in the DNA coatings of micrometre-sized particles gives us in situ control over the inter-particle binding strength and association kinetics. We can finely tune and even switch off the attractions between particles, rendering them inert unless they are heated or held together--like a nano-contact glue. The novel kinetic control offered by the switchable self-protected attractions is explained with a simple quantitative model that emphasizes the competition between intra- and inter-particle hybridization, and the practical utility is demonstrated by the assembly of designer clusters in concentrated suspensions. With self-protection, both the suspension and assembly product are stable, whereas conventional attractive colloids would quickly aggregate. This remarkable functionality makes our self-protected colloids a novel material that greatly extends the utility of DNA-functionalized systems, enabling more versatile, multi-stage assembly approaches.

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Year:  2009        PMID: 19525950     DOI: 10.1038/nmat2471

Source DB:  PubMed          Journal:  Nat Mater        ISSN: 1476-1122            Impact factor:   43.841


  26 in total

1.  Morphological diversity of DNA-colloidal self-assembly.

Authors:  Alexei V Tkachenko
Journal:  Phys Rev Lett       Date:  2002-09-16       Impact factor: 9.161

Review 2.  A revolution in optical manipulation.

Authors:  David G Grier
Journal:  Nature       Date:  2003-08-14       Impact factor: 49.962

3.  Prediction of hybridization and melting for double-stranded nucleic acids.

Authors:  Roumen A Dimitrov; Michael Zuker
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

4.  Reversible self-assembly and directed assembly of DNA-linked micrometer-sized colloids.

Authors:  Marie-Pierre Valignat; Olivier Theodoly; John C Crocker; William B Russel; Paul M Chaikin
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-09       Impact factor: 11.205

5.  Optical forces arising from phase gradients.

Authors:  Yohai Roichman; Bo Sun; Yael Roichman; Jesse Amato-Grill; David G Grier
Journal:  Phys Rev Lett       Date:  2008-01-08       Impact factor: 9.161

6.  DNA-guided crystallization of colloidal nanoparticles.

Authors:  Dmytro Nykypanchuk; Mathew M Maye; Daniel van der Lelie; Oleg Gang
Journal:  Nature       Date:  2008-01-31       Impact factor: 49.962

7.  Simple quantitative model for the reversible association of DNA coated colloids.

Authors:  Rémi Dreyfus; Mirjam E Leunissen; Roujie Sha; Alexei V Tkachenko; Nadrian C Seeman; David J Pine; Paul M Chaikin
Journal:  Phys Rev Lett       Date:  2009-01-27       Impact factor: 9.161

8.  DNA-regulated micro- and nanoparticle assembly.

Authors:  Mathew M Maye; Dmytro Nykypanchuk; Daniel van der Lelie; Oleg Gang
Journal:  Small       Date:  2007-10       Impact factor: 13.281

9.  Gene synthesis machines: DNA chemistry and its uses.

Authors:  M H Caruthers
Journal:  Science       Date:  1985-10-18       Impact factor: 47.728

10.  Self-healing and thermoreversible rubber from supramolecular assembly.

Authors:  Philippe Cordier; François Tournilhac; Corinne Soulié-Ziakovic; Ludwik Leibler
Journal:  Nature       Date:  2008-02-21       Impact factor: 49.962

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  28 in total

1.  Binding and cleavage of DNA with the restriction enzyme EcoR1 using time-resolved second harmonic generation.

Authors:  Benjamin Doughty; Samuel W Kazer; Kenneth B Eisenthal
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-23       Impact factor: 11.205

2.  Re-entrant melting as a design principle for DNA-coated colloids.

Authors:  Stefano Angioletti-Uberti; Bortolo M Mognetti; Daan Frenkel
Journal:  Nat Mater       Date:  2012-04-29       Impact factor: 43.841

3.  Tailoring DNA structure to increase target hybridization kinetics on surfaces.

Authors:  Andrew E Prigodich; One-Sun Lee; Weston L Daniel; Dwight S Seferos; George C Schatz; Chad A Mirkin
Journal:  J Am Chem Soc       Date:  2010-08-11       Impact factor: 15.419

4.  Colloidal self-assembly: Melting also on cooling.

Authors:  Oleg Gang
Journal:  Nat Mater       Date:  2012-05-22       Impact factor: 43.841

5.  Designing DNA-grafted particles that self-assemble into desired crystalline structures using the genetic algorithm.

Authors:  Babji Srinivasan; Thi Vo; Yugang Zhang; Oleg Gang; Sanat Kumar; Venkat Venkatasubramanian
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-28       Impact factor: 11.205

6.  DNA nanotechnology: Hot and sticky or cold and aloof.

Authors:  Vincent M Rotello
Journal:  Nat Mater       Date:  2009-07       Impact factor: 43.841

7.  Magnetic manipulation of self-assembled colloidal asters.

Authors:  Alexey Snezhko; Igor S Aranson
Journal:  Nat Mater       Date:  2011-08-07       Impact factor: 43.841

8.  Direct measurements of DNA-mediated colloidal interactions and their quantitative modeling.

Authors:  W Benjamin Rogers; John C Crocker
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-06       Impact factor: 11.205

9.  Switching binary states of nanoparticle superlattices and dimer clusters by DNA strands.

Authors:  Mathew M Maye; Mudalige Thilak Kumara; Dmytro Nykypanchuk; William B Sherman; Oleg Gang
Journal:  Nat Nanotechnol       Date:  2009-12-20       Impact factor: 39.213

10.  Simulating the entropic collapse of coarse-grained chromosomes.

Authors:  Tyler N Shendruk; Martin Bertrand; Hendrick W de Haan; James L Harden; Gary W Slater
Journal:  Biophys J       Date:  2015-02-17       Impact factor: 4.033

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