Literature DB >> 19521691

Time-resolved flow-flash FT-IR difference spectroscopy: the kinetics of CO photodissociation from myoglobin revisited.

Michael Schleeger1, Christoph Wagner, Michiel J Vellekoop, Bernhard Lendl, Joachim Heberle.   

Abstract

Fourier-transform infrared (FT-IR) difference spectroscopy has been proven to be a significant tool in biospectroscopy. In particular, the step-scan technique monitors structural and electronic changes at time resolutions down to a few nanoseconds retaining the multiplex advantage of FT-IR. For the elucidation of the functional mechanisms of proteins, this technique is currently limited to repetitive systems undergoing a rapid photocycle. To overcome this obstacle, we developed a flow-flash experiment in a miniaturised flow channel which was integrated into a step-scan FT-IR spectroscopic setup. As a proof of principle, we studied the rebinding reaction of CO to myoglobin after photodissociation. The use of microfluidics reduced the sample consumption drastically such that a typical step-scan experiment takes only a few 10 microliter [corrected] of a millimolar sample solution, making this method particularly interesting for the investigation of biological samples that are only available in small quantities. Moreover, the flow cell provides the unique opportunity to assess the reaction mechanism of proteins that cycle slowly or react irreversibly. We infer that this novel approach will help in the elucidation of molecular reactions as complex as those of vectorial ion transfer in membrane proteins. The potential application to the oxygen splitting reaction of cytochrome c oxidase is discussed.

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Year:  2009        PMID: 19521691      PMCID: PMC2709881          DOI: 10.1007/s00216-009-2871-0

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  18 in total

1.  Reactions of cytochrome oxidase with oxygen and carbon monoxide.

Authors:  Q H GIBSON; C GREENWOOD
Journal:  Biochem J       Date:  1963-03       Impact factor: 3.857

2.  Time-resolved FT-IR spectroscopy traces signal relay within the blue-light receptor AppA.

Authors:  Teresa Majerus; Tilman Kottke; Wouter Laan; Klaas Hellingwerf; Joachim Heberle
Journal:  Chemphyschem       Date:  2007-08-24       Impact factor: 3.102

3.  Some pitfalls in curve-fitting and how to avoid them: a case in point.

Authors:  R I Shrager; R W Hendler
Journal:  J Biochem Biophys Methods       Date:  1998-06-11

4.  Nanosecond step-scan FTIR spectroscopy of hemoglobin: ligand recombination and protein conformational changes.

Authors:  X Hu; H Frei; T G Spiro
Journal:  Biochemistry       Date:  1996-10-08       Impact factor: 3.162

Review 5.  Kinetic pathways and barriers for ligand binding to myoglobin.

Authors:  J S Olson; G N Phillips
Journal:  J Biol Chem       Date:  1996-07-26       Impact factor: 5.157

6.  Ligand migration pathway and protein dynamics in myoglobin: a time-resolved crystallographic study on L29W MbCO.

Authors:  Marius Schmidt; Karin Nienhaus; Reinhard Pahl; Angela Krasselt; Spencer Anderson; Fritz Parak; G Ulrich Nienhaus; Vukica Srajer
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-05       Impact factor: 11.205

7.  Towards biochemical reaction monitoring using FT-IR synchrotron radiation.

Authors:  N Kaun; S Kulka; J Frank; U Schade; M J Vellekoop; M Harasek; B Lendl
Journal:  Analyst       Date:  2006-01-27       Impact factor: 4.616

8.  Infrared analysis of ligand- and oxidation-induced conformational changes in hemoglobins and myoglobins.

Authors:  A Dong; P Huang; B Caughey; W S Caughey
Journal:  Arch Biochem Biophys       Date:  1995-02-01       Impact factor: 4.013

9.  Protein response to photodissociation of CO from carbonmonoxymyoglobin probed by time-resolved infrared spectroscopy of the amide I band.

Authors:  T P Causgrove; R B Dyer
Journal:  Biochemistry       Date:  1993-11-16       Impact factor: 3.162

10.  Distal pocket residues affect picosecond ligand recombination in myoglobin. An experimental and molecular dynamics study of position 29 mutants.

Authors:  Q H Gibson; R Regan; R Elber; J S Olson; T E Carver
Journal:  J Biol Chem       Date:  1992-11-05       Impact factor: 5.157

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  4 in total

Review 1.  Time-resolved infrared spectroscopy in the study of photosynthetic systems.

Authors:  Alberto Mezzetti; Winfried Leibl
Journal:  Photosynth Res       Date:  2016-09-27       Impact factor: 3.573

Review 2.  Label-Free Physical Techniques and Methodologies for Proteins Detection in Microfluidic Biosensor Structures.

Authors:  Georgii Konoplev; Darina Agafonova; Liubov Bakhchova; Nikolay Mukhin; Marharyta Kurachkina; Marc-Peter Schmidt; Nikolay Verlov; Alexander Sidorov; Aleksandr Oseev; Oksana Stepanova; Andrey Kozyrev; Alexander Dmitriev; Soeren Hirsch
Journal:  Biomedicines       Date:  2022-01-18

3.  Submillisecond mixing in a continuous-flow, microfluidic mixer utilizing mid-infrared hyperspectral imaging detection.

Authors:  Drew P Kise; Donny Magana; Michael J Reddish; R Brian Dyer
Journal:  Lab Chip       Date:  2014-02-07       Impact factor: 6.799

4.  Quantification of Local Electric Field Changes at the Active Site of Cytochrome c Oxidase by Fourier Transform Infrared Spectroelectrochemical Titrations.

Authors:  Federico Baserga; Jovan Dragelj; Jacek Kozuch; Hendrik Mohrmann; Ernst-Walter Knapp; Sven T Stripp; Joachim Heberle
Journal:  Front Chem       Date:  2021-04-27       Impact factor: 5.221

  4 in total

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