Literature DB >> 19518999

Nonequilibirum assembly, retroviruses, and conical structures.

Artem Levandovsky1, Roya Zandi.   

Abstract

We study the spontaneous assembly of viral shells composed of several identical subunits under nonequilibrium conditions. We find that within the basic continuum elasticity framework, the nonequilibrium assembly process is able to predict the formation of structures pertinent to retroviruses. Our minimal model of assembly yields a unified one-dimensional phase diagram in which the appearance of spherical, irregular, conical and cylindrical structures of retroviruses is seen to be governed by the spontaneous curvature of protein subunits.

Mesh:

Year:  2009        PMID: 19518999     DOI: 10.1103/PhysRevLett.102.198102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  22 in total

1.  Electron cryotomography studies of maturing HIV-1 particles reveal the assembly pathway of the viral core.

Authors:  Cora L Woodward; Sarah N Cheng; Grant J Jensen
Journal:  J Virol       Date:  2014-11-12       Impact factor: 5.103

2.  The Robust Assembly of Small Symmetric Nanoshells.

Authors:  Jef Wagner; Roya Zandi
Journal:  Biophys J       Date:  2015-09-01       Impact factor: 4.033

3.  Modeling Viral Capsid Assembly.

Authors:  Michael F Hagan
Journal:  Adv Chem Phys       Date:  2014       Impact factor: 1.000

4.  Design principles for nonequilibrium self-assembly.

Authors:  Michael Nguyen; Suriyanarayanan Vaikuntanathan
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-22       Impact factor: 11.205

5.  Reaction-diffusion basis of retroviral infectivity.

Authors:  S Kashif Sadiq
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2016-11-13       Impact factor: 4.226

6.  Early stages of the HIV-1 capsid protein lattice formation.

Authors:  John M A Grime; Gregory A Voth
Journal:  Biophys J       Date:  2012-10-16       Impact factor: 4.033

7.  Determinants of the HIV-1 core assembly pathway.

Authors:  Claudia S López; Jacob D Eccles; Amelia Still; Rachel E Sloan; Robin Lid Barklis; Seyram M Tsagli; Eric Barklis
Journal:  Virology       Date:  2011-06-14       Impact factor: 3.616

8.  Applying molecular crowding models to simulations of virus capsid assembly in vitro.

Authors:  Gregory R Smith; Lu Xie; Byoungkoo Lee; Russell Schwartz
Journal:  Biophys J       Date:  2014-01-07       Impact factor: 4.033

9.  Using Markov state models to study self-assembly.

Authors:  Matthew R Perkett; Michael F Hagan
Journal:  J Chem Phys       Date:  2014-06-07       Impact factor: 3.488

10.  Unclosed HIV-1 capsids suggest a curled sheet model of assembly.

Authors:  Zhiheng Yu; Megan J Dobro; Cora L Woodward; Artem Levandovsky; Cindy M Danielson; Virginie Sandrin; Jiong Shi; Christopher Aiken; Roya Zandi; Thomas J Hope; Grant J Jensen
Journal:  J Mol Biol       Date:  2012-10-16       Impact factor: 5.469

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