Literature DB >> 19513534

Anoctamin and transmembrane channel-like proteins are evolutionarily related.

Yoonsoo Hahn1, Dong Seon Kim, Ira H Pastan, Byungkook Lee.   

Abstract

The anoctamin (ANO) family of proteins, consisting of 10 members in mammals, are transmembrane proteins that have Ca2+-activated Cl- channel activity. The transmembrane channel-like (TMC) family of proteins, consisting of 8 members in mammals, are also transmembrane proteins of which mutations are implicated in various human conditions, such as hearing loss and epidermodysplasia verruciformis. Here we show that ANO and TMC proteins share high sequence similarity and probably the same membrane topology, indicating that these proteins are evolutionarily related. We found many conserved amino acid residues between the two families of proteins, especially in regions spanning the transmembrane domains TM1, TM4-TM5, and TM6-TM7. These findings imply that these proteins form one large family, which we term ANO/TMC superfamily and that TMC proteins also function as channels for Cl- or other ions. The ANO/TMC superfamily proteins are present in almost all diverse groups of eukaryotic organisms, suggesting that the proteins function in important biological processes, such as ion homeostasis, in eukaryotic cells.

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Year:  2009        PMID: 19513534      PMCID: PMC2695565          DOI: 10.3892/ijmm_00000205

Source DB:  PubMed          Journal:  Int J Mol Med        ISSN: 1107-3756            Impact factor:   4.101


  33 in total

1.  CHROMA: consensus-based colouring of multiple alignments for publication.

Authors:  L Goodstadt; C P Ponting
Journal:  Bioinformatics       Date:  2001-09       Impact factor: 6.937

2.  T-Coffee: A novel method for fast and accurate multiple sequence alignment.

Authors:  C Notredame; D G Higgins; J Heringa
Journal:  J Mol Biol       Date:  2000-09-08       Impact factor: 5.469

3.  The spindle-associated transmembrane protein Axs identifies a membranous structure ensheathing the meiotic spindle.

Authors:  Joseph Kramer; R Scott Hawley
Journal:  Nat Cell Biol       Date:  2003-03       Impact factor: 28.824

4.  Mutations in two adjacent novel genes are associated with epidermodysplasia verruciformis.

Authors:  Nicolas Ramoz; Luis-Alfredo Rueda; Bakar Bouadjar; Luz-Stella Montoya; Gérard Orth; Michel Favre
Journal:  Nat Genet       Date:  2002-11-11       Impact factor: 38.330

5.  Beethoven, a mouse model for dominant, progressive hearing loss DFNA36.

Authors:  Sarah Vreugde; Alexandra Erven; Corné J Kros; Walter Marcotti; Helmut Fuchs; Kiyoto Kurima; Edward R Wilcox; Thomas B Friedman; Andrew J Griffith; Rudi Balling; Martin Hrabé De Angelis; Karen B Avraham; Karen P Steel
Journal:  Nat Genet       Date:  2002-02-19       Impact factor: 38.330

6.  Dominant and recessive deafness caused by mutations of a novel gene, TMC1, required for cochlear hair-cell function.

Authors:  Kiyoto Kurima; Linda M Peters; Yandan Yang; Saima Riazuddin; Zubair M Ahmed; Sadaf Naz; Deidre Arnaud; Stacy Drury; Jianhong Mo; Tomoko Makishima; Manju Ghosh; P S N Menon; Dilip Deshmukh; Carole Oddoux; Harry Ostrer; Shaheen Khan; Sheikh Riazuddin; Prescott L Deininger; Lori L Hampton; Susan L Sullivan; James F Battey; Bronya J B Keats; Edward R Wilcox; Thomas B Friedman; Andrew J Griffith
Journal:  Nat Genet       Date:  2002-02-19       Impact factor: 38.330

Review 7.  Anoctamin/TMEM16 family members are Ca2+-activated Cl- channels.

Authors:  H Criss Hartzell; Kuai Yu; Qinhuan Xiao; Li-Ting Chien; Zhiqiang Qu
Journal:  J Physiol       Date:  2008-11-17       Impact factor: 5.182

8.  Characterization of the transmembrane channel-like (TMC) gene family: functional clues from hearing loss and epidermodysplasia verruciformis.

Authors:  Kiyoto Kurima; Yandan Yang; Katherine Sorber; Andrew J Griffith
Journal:  Genomics       Date:  2003-09       Impact factor: 5.736

9.  NGEP, a gene encoding a membrane protein detected only in prostate cancer and normal prostate.

Authors:  Tapan K Bera; Sudipto Das; Hiroshi Maeda; Richard Beers; Curt D Wolfgang; Vasantha Kumar; Yoonsoo Hahn; Byungkook Lee; Ira Pastan
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-23       Impact factor: 11.205

10.  TMC and EVER genes belong to a larger novel family, the TMC gene family encoding transmembrane proteins.

Authors:  Gabor Keresztes; Hideki Mutai; Stefan Heller
Journal:  BMC Genomics       Date:  2003-06-17       Impact factor: 3.969

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  21 in total

1.  TMC1 Forms the Pore of Mechanosensory Transduction Channels in Vertebrate Inner Ear Hair Cells.

Authors:  Bifeng Pan; Nurunisa Akyuz; Xiao-Ping Liu; Yukako Asai; Carl Nist-Lund; Kiyoto Kurima; Bruce H Derfler; Bence György; Walrati Limapichat; Sanket Walujkar; Lahiru N Wimalasena; Marcos Sotomayor; David P Corey; Jeffrey R Holt
Journal:  Neuron       Date:  2018-08-22       Impact factor: 17.173

Review 2.  Distinct functions of TMC channels: a comparative overview.

Authors:  Xiaomin Yue; Yi Sheng; Lijun Kang; Rui Xiao
Journal:  Cell Mol Life Sci       Date:  2019-10-04       Impact factor: 9.261

3.  Mechanical gating of the auditory transduction channel TMC1 involves the fourth and sixth transmembrane helices.

Authors:  Nurunisa Akyuz; K Domenica Karavitaki; Bifeng Pan; Panos I Tamvakologos; Kelly P Brock; Yaqiao Li; Debora S Marks; David P Corey
Journal:  Sci Adv       Date:  2022-07-13       Impact factor: 14.957

4.  Expression of a TMC6-TMC8-CIB1 heterotrimeric complex in lymphocytes is regulated by each of the components.

Authors:  Chuan-Jin Wu; Xing Li; Connie L Sommers; Kiyoto Kurima; Sunmee Huh; Grace Bugos; Lijin Dong; Wenmei Li; Andrew J Griffith; Lawrence E Samelson
Journal:  J Biol Chem       Date:  2020-09-11       Impact factor: 5.157

Review 5.  Chloride channels: often enigmatic, rarely predictable.

Authors:  Charity Duran; Christopher H Thompson; Qinghuan Xiao; H Criss Hartzell
Journal:  Annu Rev Physiol       Date:  2010       Impact factor: 19.318

Review 6.  Modulating Ca²⁺ signals: a common theme for TMEM16, Ist2, and TMC.

Authors:  Karl Kunzelmann; Ines Cabrita; Podchanart Wanitchakool; Jiraporn Ousingsawat; Lalida Sirianant; Roberta Benedetto; Rainer Schreiber
Journal:  Pflugers Arch       Date:  2015-12-23       Impact factor: 3.657

Review 7.  Function and Dysfunction of TMC Channels in Inner Ear Hair Cells.

Authors:  David P Corey; Nurunisa Akyuz; Jeffrey R Holt
Journal:  Cold Spring Harb Perspect Med       Date:  2019-10-01       Impact factor: 6.915

Review 8.  The Mechanosensory Transduction Machinery in Inner Ear Hair Cells.

Authors:  Wang Zheng; Jeffrey R Holt
Journal:  Annu Rev Biophys       Date:  2020-12-07       Impact factor: 12.981

9.  TMC4 is a novel chloride channel involved in high-concentration salt taste sensation.

Authors:  Yoichi Kasahara; Masataka Narukawa; Keiko Abe; Tomiko Asakura; Yoshiro Ishimaru; Shinji Kanda; Chie Umatani; Yasunori Takayama; Makoto Tominaga; Yoshitaka Oka; Kaori Kondo; Takashi Kondo; Ayako Takeuchi; Takumi Misaka
Journal:  J Physiol Sci       Date:  2021-08-25       Impact factor: 2.781

10.  Microarray gene expression profiles from mature gonad tissues of Atlantic bluefin tuna, Thunnus thynnus in the Gulf of Mexico.

Authors:  Luke D Gardner; Nishad Jayasundara; Pedro C Castilho; Barbara Block
Journal:  BMC Genomics       Date:  2012-10-05       Impact factor: 3.969

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