Literature DB >> 19492821

High-resolution structural analysis of a DNA nanostructure by cryoEM.

Takayuki Kato1, Russell P Goodman, Christoph M Erben, Andrew J Turberfield, Keiichi Namba.   

Abstract

Many DNA nanostructures have been produced and a wide range of potential applications have been proposed. However, confirmation of accurate 3D construction is particularly challenging. Here, we demonstrate that cryoEM may be exploited to obtain structural information at sufficient resolution to visualize the DNA helix and reveal the absolute stereochemistry of a 7 nm self-assembled DNA tetrahedron. Structural analysis at such high resolution by cryoEM image analysis is unprecedented for any biological molecule of this size.

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Year:  2009        PMID: 19492821     DOI: 10.1021/nl901265n

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  23 in total

1.  Placing molecules with Bohr radius resolution using DNA origami.

Authors:  Jonas J Funke; Hendrik Dietz
Journal:  Nat Nanotechnol       Date:  2015-10-19       Impact factor: 39.213

2.  Complex wireframe DNA origami nanostructures with multi-arm junction vertices.

Authors:  Fei Zhang; Shuoxing Jiang; Siyu Wu; Yulin Li; Chengde Mao; Yan Liu; Hao Yan
Journal:  Nat Nanotechnol       Date:  2015-07-20       Impact factor: 39.213

3.  Cryo-EM structure of a 3D DNA-origami object.

Authors:  Xiao-Chen Bai; Thomas G Martin; Sjors H W Scheres; Hendrik Dietz
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-19       Impact factor: 11.205

4.  Crystallization of a self-assembled three-dimensional DNA nanostructure.

Authors:  Kimberly N Rendek; Raimund Fromme; Ingo Grotjohann; Petra Fromme
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-01-31

Review 5.  Diffraction Techniques in Structural Biology.

Authors:  Martin Egli
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2016-06-01

Review 6.  The many twists and turns of DNA: template, telomere, tool, and target.

Authors:  Martin Egli; Pradeep S Pallan
Journal:  Curr Opin Struct Biol       Date:  2010-04-08       Impact factor: 6.809

7.  Biological stimuli and biomolecules in the assembly and manipulation of nanoscale polymeric particles.

Authors:  Lyndsay M Randolph; Miao-Ping Chien; Nathan C Gianneschi
Journal:  Chem Sci       Date:  2012-05-01       Impact factor: 9.825

8.  Controlling and switching the morphology of micellar nanoparticles with enzymes.

Authors:  Ti-Hsuan Ku; Miao-Ping Chien; Matthew P Thompson; Robert S Sinkovits; Norman H Olson; Timothy S Baker; Nathan C Gianneschi
Journal:  J Am Chem Soc       Date:  2011-04-04       Impact factor: 15.419

9.  A polyhedron made of tRNAs.

Authors:  Isil Severcan; Cody Geary; Arkadiusz Chworos; Neil Voss; Erica Jacovetty; Luc Jaeger
Journal:  Nat Chem       Date:  2010-07-18       Impact factor: 24.427

10.  In vitro assembly of cubic RNA-based scaffolds designed in silico.

Authors:  Kirill A Afonin; Eckart Bindewald; Alan J Yaghoubian; Neil Voss; Erica Jacovetty; Bruce A Shapiro; Luc Jaeger
Journal:  Nat Nanotechnol       Date:  2010-08-29       Impact factor: 39.213

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