Literature DB >> 19489732

The advent of near-atomic resolution in single-particle electron microscopy.

Yifan Cheng1, Thomas Walz.   

Abstract

Single-particle electron microscopy (EM) can provide structural information for a large variety of biological molecules, ranging from small proteins to large macromolecular assemblies, without the need to produce crystals. The year 2008 has become a landmark year for single-particle EM as for the first time density maps have been produced at a resolution that made it possible to trace protein backbones or even to build atomic models. In this review, we highlight some of the recent successes achieved by single-particle EM and describe the individual steps involved in producing a density map by this technique. We also discuss some of the remaining challenges and areas, in which further advances would have a great impact on the results that can be achieved by single-particle EM.

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Year:  2009        PMID: 19489732     DOI: 10.1146/annurev.biochem.78.070507.140543

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   23.643


  16 in total

1.  Initial evaluation of a direct detection device detector for single particle cryo-electron microscopy.

Authors:  Anna-Clare Milazzo; Anchi Cheng; Arne Moeller; Dmitry Lyumkis; Erica Jacovetty; James Polukas; Mark H Ellisman; Nguyen-Huu Xuong; Bridget Carragher; Clinton S Potter
Journal:  J Struct Biol       Date:  2011-09-10       Impact factor: 2.867

2.  Visualizing proteins and macromolecular complexes by negative stain EM: from grid preparation to image acquisition.

Authors:  David S Booth; Agustin Avila-Sakar; Yifan Cheng
Journal:  J Vis Exp       Date:  2011-12-22       Impact factor: 1.355

3.  Detailed structural and assembly model of the type II secretion pilus from sparse data.

Authors:  Manuel Campos; Michaël Nilges; David A Cisneros; Olivera Francetic
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-02       Impact factor: 11.205

4.  SubspaceEM: A fast maximum-a-posteriori algorithm for cryo-EM single particle reconstruction.

Authors:  Nicha C Dvornek; Fred J Sigworth; Hemant D Tagare
Journal:  J Struct Biol       Date:  2015-03-31       Impact factor: 2.867

Review 5.  Electron microscopy studies of nucleosome remodelers.

Authors:  Andres E Leschziner
Journal:  Curr Opin Struct Biol       Date:  2011-10-29       Impact factor: 6.809

Review 6.  Functional and structural studies of TRP channels heterologously expressed in budding yeast.

Authors:  Vera Moiseenkova-Bell; Theodore G Wensel
Journal:  Adv Exp Med Biol       Date:  2011       Impact factor: 2.622

7.  An introduction to maximum-likelihood methods in cryo-EM.

Authors:  Fred J Sigworth; Peter C Doerschuk; Jose-Maria Carazo; Sjors H W Scheres
Journal:  Methods Enzymol       Date:  2010       Impact factor: 1.600

8.  Three-dimensional asymmetric reconstruction of tailed bacteriophage.

Authors:  Jinghua Tang; Robert S Sinkovits; Timothy S Baker
Journal:  Methods Enzymol       Date:  2010       Impact factor: 1.600

9.  Getting a grip on complexes.

Authors:  Yan Nie; Cristina Viola; Christoph Bieniossek; Simon Trowitzsch; Lakshmi Sumitra Vijay-Achandran; Maxime Chaillet; Frederic Garzoni; Imre Berger
Journal:  Curr Genomics       Date:  2009-12       Impact factor: 2.236

Review 10.  Strategy for the use of affinity grids to prepare non-His-tagged macromolecular complexes for single-particle electron microscopy.

Authors:  Deborah F Kelly; Danijela Dukovski; Thomas Walz
Journal:  J Mol Biol       Date:  2010-05-24       Impact factor: 5.469

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