Literature DB >> 19487562

The Ccr4-Pop2-NOT mRNA deadenylase contributes to septin organization in Saccharomyces cerevisiae.

Ana Traven1, Traude H Beilharz, Tricia L Lo, Franziska Lueder, Thomas Preiss, Jörg Heierhorst.   

Abstract

In yeast, assembly of the septins at the cell cortex is required for a series of key cell cycle events: bud-site selection, the morphogenesis and mitotic exit checkpoints, and cytokinesis. Here we establish that the Ccr4-Pop2-NOT mRNA deadenylase contributes to septin organization. mRNAs encoding regulators of septin assembly (Ccd42, Cdc24, Rga1, Rga2, Bem3, Gin4, Cla4, and Elm1) presented with short poly(A) tails at steady state in wild-type (wt) cells, suggesting their translation could be restricted by deadenylation. Deadenylation of septin regulators was dependent on the major cellular mRNA deadenylase Ccr4-Pop2-NOT, whereas the alternative deadenylase Pan2 played a minor role. Consistent with deadenylation of septin regulators being important for function, deletion of deadenylase subunits CCR4 or POP2, but not PAN2, resulted in septin morphology defects (e.g., ectopic bud-localized septin rings), particularly upon activation of the Cdc28-inhibitory kinase Swe1. Aberrant septin staining was also observed in the deadenylase-dead ccr4-1 mutant, demonstrating the deadenylase activity of Ccr4-Pop2 is required. Moreover, ccr4Delta, pop2Delta, and ccr4-1 mutants showed aberrant cell morphology previously observed in septin assembly mutants and exhibited genetic interactions with mutations that compromise septin assembly (shs1Delta, cla4Delta, elm1Delta, and gin4Delta). Mutations in the Not subunits of Ccr4-Pop2-NOT, which are thought to predominantly function in transcriptional control, also resulted in septin organization defects. Therefore, both mRNA deadenylase and transcriptional functions of Ccr4-Pop2-NOT contribute to septin organization in yeast.

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Year:  2009        PMID: 19487562      PMCID: PMC2728883          DOI: 10.1534/genetics.109.104414

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  45 in total

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Authors:  Roy Parker; Haiwei Song
Journal:  Nat Struct Mol Biol       Date:  2004-02       Impact factor: 15.369

2.  The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae.

Authors:  M Tucker; M A Valencia-Sanchez; R R Staples; J Chen; C L Denis; R Parker
Journal:  Cell       Date:  2001-02-09       Impact factor: 41.582

3.  Ccr4p is the catalytic subunit of a Ccr4p/Pop2p/Notp mRNA deadenylase complex in Saccharomyces cerevisiae.

Authors:  Morgan Tucker; Robin R Staples; Marco A Valencia-Sanchez; Denise Muhlrad; Roy Parker
Journal:  EMBO J       Date:  2002-03-15       Impact factor: 11.598

4.  Posttranscriptional regulation of the RAD5 DNA repair gene by the Dun1 kinase and the Pan2-Pan3 poly(A)-nuclease complex contributes to survival of replication blocks.

Authors:  Andrew Hammet; Brietta L Pike; Jörg Heierhorst
Journal:  J Biol Chem       Date:  2002-04-12       Impact factor: 5.157

5.  Late-G1 cyclin-CDK activity is essential for control of cell morphogenesis in budding yeast.

Authors:  Jason Moffat; Brenda Andrews
Journal:  Nat Cell Biol       Date:  2003-12-14       Impact factor: 28.824

6.  The role of Cdc42p GTPase-activating proteins in assembly of the septin ring in yeast.

Authors:  Juliane P Caviston; Mark Longtine; John R Pringle; Erfei Bi
Journal:  Mol Biol Cell       Date:  2003-07-25       Impact factor: 4.138

7.  Phosphorylation-dependent regulation of septin dynamics during the cell cycle.

Authors:  Jeroen Dobbelaere; Matthew S Gentry; Richard L Hallberg; Yves Barral
Journal:  Dev Cell       Date:  2003-03       Impact factor: 12.270

Review 8.  Global control of gene expression in yeast by the Ccr4-Not complex.

Authors:  Martine A Collart
Journal:  Gene       Date:  2003-08-14       Impact factor: 3.688

9.  Septin ring assembly involves cycles of GTP loading and hydrolysis by Cdc42p.

Authors:  Amy S Gladfelter; Indrani Bose; Trevin R Zyla; Elaine S G Bardes; Daniel J Lew
Journal:  J Cell Biol       Date:  2002-01-21       Impact factor: 10.539

10.  Septin collar formation in budding yeast requires GTP binding and direct phosphorylation by the PAK, Cla4.

Authors:  Matthias Versele; Jeremy Thorner
Journal:  J Cell Biol       Date:  2004-03-01       Impact factor: 10.539

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  12 in total

1.  Subunits of the Drosophila CCR4-NOT complex and their roles in mRNA deadenylation.

Authors:  Claudia Temme; Lianbing Zhang; Elisabeth Kremmer; Christian Ihling; Aymeric Chartier; Andrea Sinz; Martine Simonelig; Elmar Wahle
Journal:  RNA       Date:  2010-05-26       Impact factor: 4.942

2.  The mRNA decay pathway regulates the expression of the Flo11 adhesin and biofilm formation in Saccharomyces cerevisiae.

Authors:  Tricia L Lo; Yue Qu; Nathalie Uwamahoro; Tara Quenault; Traude H Beilharz; Ana Traven
Journal:  Genetics       Date:  2012-05-17       Impact factor: 4.562

3.  RNA-binding protein Khd1 and Ccr4 deadenylase play overlapping roles in the cell wall integrity pathway in Saccharomyces cerevisiae.

Authors:  Wataru Ito; Xia Li; Kaoru Irie; Tomoaki Mizuno; Kenji Irie
Journal:  Eukaryot Cell       Date:  2011-08-26

4.  ePAT: a simple method to tag adenylated RNA to measure poly(A)-tail length and other 3' RACE applications.

Authors:  Amrei Jänicke; John Vancuylenberg; Peter R Boag; Ana Traven; Traude H Beilharz
Journal:  RNA       Date:  2012-04-27       Impact factor: 4.942

5.  The yeast PUF protein Puf5 has Pop2-independent roles in response to DNA replication stress.

Authors:  Ana Traven; Tricia L Lo; Trevor Lithgow; Jörg Heierhorst
Journal:  PLoS One       Date:  2010-05-14       Impact factor: 3.240

6.  Pbp1 is involved in Ccr4- and Khd1-mediated regulation of cell growth through association with ribosomal proteins Rpl12a and Rpl12b.

Authors:  Yuichi Kimura; Kaoru Irie; Kenji Irie
Journal:  Eukaryot Cell       Date:  2013-04-05

7.  Spt6 Association with RNA Polymerase II Directs mRNA Turnover During Transcription.

Authors:  Raghuvar Dronamraju; Austin J Hepperla; Yoichiro Shibata; Alexander T Adams; Terry Magnuson; Ian J Davis; Brian D Strahl
Journal:  Mol Cell       Date:  2018-06-21       Impact factor: 17.970

8.  Different Regulations of ROM2 and LRG1 Expression by Ccr4, Pop2, and Dhh1 in the Saccharomyces cerevisiae Cell Wall Integrity Pathway.

Authors:  Xia Li; Tetsuro Ohmori; Kaoru Irie; Yuichi Kimura; Yasuyuki Suda; Tomoaki Mizuno; Kenji Irie
Journal:  mSphere       Date:  2016-09-28       Impact factor: 4.389

9.  Cytoplasmic deadenylase Ccr4 is required for translational repression of LRG1 mRNA in the stationary phase.

Authors:  Duong Long Duy; Yasuyuki Suda; Kenji Irie
Journal:  PLoS One       Date:  2017-02-23       Impact factor: 3.240

10.  Novel interaction between CCR4 and CAF1 in rice CCR4-NOT deadenylase complex.

Authors:  Wei-Lun Chou; Yue-Lin Chung; Jhen-Cheng Fang; Chung-An Lu
Journal:  Plant Mol Biol       Date:  2016-10-06       Impact factor: 4.076

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