Literature DB >> 12957374

Global control of gene expression in yeast by the Ccr4-Not complex.

Martine A Collart1.   

Abstract

The Ccr4-Not complex is a global regulator of gene expression that is conserved from yeast to human. It is a large complex that in the yeast Saccharmyces cerevisiae exists in two prominent forms of 0.9-1.2 and 1.9-2 MDa, and consists of at least nine core subunits: the five Not proteins (Not1p to Not5p), Caf1p, Caf40p, Caf130p and Ccr4p. It was initially described to be a global regulator of transcription, based upon the observation that the levels of many transcripts were increased or decreased in mutants. However, the recent finding that Caf1p and Ccr4p encode the major yeast deadenylase has suggested that this complex may additionally play a role in RNA degradation. In this review, the events that led to the identification of the Ccr4-Not complex are described and the elements that clearly demonstrate that the Ccr4-Not complex regulates many different cellular functions are discussed, including RNA degradation and transcription initiation. The evidence points to a role for the Ccr4-Not complex as a regulatory platform that senses nutrient levels and stress.

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Year:  2003        PMID: 12957374     DOI: 10.1016/s0378-1119(03)00672-3

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  99 in total

1.  Exploring the O-GlcNAc proteome: direct identification of O-GlcNAc-modified proteins from the brain.

Authors:  Nelly Khidekel; Scott B Ficarro; Eric C Peters; Linda C Hsieh-Wilson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-30       Impact factor: 11.205

2.  Cnot1, Cnot2, and Cnot3 maintain mouse and human ESC identity and inhibit extraembryonic differentiation.

Authors:  Xiaofeng Zheng; Raluca Dumitru; Brad L Lackford; Johannes M Freudenberg; Ajeet P Singh; Trevor K Archer; Raja Jothi; Guang Hu
Journal:  Stem Cells       Date:  2012-05       Impact factor: 6.277

3.  The role of the CNOT1 subunit of the CCR4-NOT complex in mRNA deadenylation and cell viability.

Authors:  Kentaro Ito; Akinori Takahashi; Masahiro Morita; Toru Suzuki; Tadashi Yamamoto
Journal:  Protein Cell       Date:  2011-10-06       Impact factor: 14.870

4.  Crystal structure of the human CNOT6L nuclease domain reveals strict poly(A) substrate specificity.

Authors:  Hui Wang; Masahiro Morita; Xiuna Yang; Toru Suzuki; Wen Yang; Jiao Wang; Kentaro Ito; Quan Wang; Cong Zhao; Mark Bartlam; Tadashi Yamamoto; Zihe Rao
Journal:  EMBO J       Date:  2010-07-13       Impact factor: 11.598

Review 5.  The structural basis for deadenylation by the CCR4-NOT complex.

Authors:  Mark Bartlam; Tadashi Yamamoto
Journal:  Protein Cell       Date:  2010-06-04       Impact factor: 14.870

6.  Global identification and characterization of both O-GlcNAcylation and phosphorylation at the murine synapse.

Authors:  Jonathan C Trinidad; David T Barkan; Brittany F Gulledge; Agnes Thalhammer; Andrej Sali; Ralf Schoepfer; Alma L Burlingame
Journal:  Mol Cell Proteomics       Date:  2012-05-29       Impact factor: 5.911

7.  Subunits of the Drosophila CCR4-NOT complex and their roles in mRNA deadenylation.

Authors:  Claudia Temme; Lianbing Zhang; Elisabeth Kremmer; Christian Ihling; Aymeric Chartier; Andrea Sinz; Martine Simonelig; Elmar Wahle
Journal:  RNA       Date:  2010-05-26       Impact factor: 4.942

8.  Nucleolar localization of the yeast RNA exosome subunit Rrp44 hints at early pre-rRNA processing as its main function.

Authors:  Ellen K Okuda; Fernando A Gonzales-Zubiate; Olivier Gadal; Carla C Oliveira
Journal:  J Biol Chem       Date:  2020-06-17       Impact factor: 5.157

9.  Unlocking the DEAD-box: a key to cryptococcal virulence?

Authors:  Lena J Heung; Maurizio Del Poeta
Journal:  J Clin Invest       Date:  2005-03       Impact factor: 14.808

10.  The RNA polymerase II subunit Rpb4p mediates decay of a specific class of mRNAs.

Authors:  Rona Lotan; Vicky Goler Bar-On; Liat Harel-Sharvit; Lea Duek; Daniel Melamed; Mordechai Choder
Journal:  Genes Dev       Date:  2005-12-15       Impact factor: 11.361

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