Literature DB >> 14749774

The enzymes and control of eukaryotic mRNA turnover.

Roy Parker1, Haiwei Song.   

Abstract

The degradation of eukaryotic mRNAs plays important roles in the modulation of gene expression, quality control of mRNA biogenesis and antiviral defenses. In the past five years, many of the enzymes involved in this process have been identified and mechanisms that modulate their activities have begun to be identified. In this review, we describe the enzymes of mRNA degradation and their properties. We highlight that there are a variety of enzymes with different specificities, suggesting that individual nucleases act on distinct subpopulations of transcripts within the cell. In several cases, translation factors that bind mRNA inhibit these nucleases. In addition, recent work has begun to identify distinct mRNP complexes that recruit the nucleases to transcripts through different mRNA-interacting proteins. These properties and complexes suggest multiple mechanisms by which mRNA degradation could be regulated.

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Year:  2004        PMID: 14749774     DOI: 10.1038/nsmb724

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  375 in total

1.  Translation drives mRNA quality control.

Authors:  Christopher J Shoemaker; Rachel Green
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

Review 2.  The roles of TTP and BRF proteins in regulated mRNA decay.

Authors:  Sandhya Sanduja; Fernando F Blanco; Dan A Dixon
Journal:  Wiley Interdiscip Rev RNA       Date:  2011 Jan-Feb       Impact factor: 9.957

3.  Replication of avocado sunblotch viroid in the yeast Saccharomyces cerevisiae.

Authors:  Clémentine Delan-Forino; Marie-Christine Maurel; Claire Torchet
Journal:  J Virol       Date:  2011-01-26       Impact factor: 5.103

4.  The structure of Ski8p, a protein regulating mRNA degradation: Implications for WD protein structure.

Authors:  A Yarrow Madrona; David K Wilson
Journal:  Protein Sci       Date:  2004-06       Impact factor: 6.725

5.  Genome-wide analysis of mRNA stability using transcription inhibitors and microarrays reveals posttranscriptional control of ribosome biogenesis factors.

Authors:  Jörg Grigull; Sanie Mnaimneh; Jeffrey Pootoolal; Mark D Robinson; Timothy R Hughes
Journal:  Mol Cell Biol       Date:  2004-06       Impact factor: 4.272

6.  Functional analysis of mRNA scavenger decapping enzymes.

Authors:  Shin-Wu Liu; Xinfu Jiao; Hudan Liu; Meigang Gu; Christopher D Lima; Megerditch Kiledjian
Journal:  RNA       Date:  2004-07-23       Impact factor: 4.942

7.  Nematode m7GpppG and m3(2,2,7)GpppG decapping: activities in Ascaris embryos and characterization of C. elegans scavenger DcpS.

Authors:  Leah S Cohen; Claudette Mikhli; Cassandra Friedman; Marzena Jankowska-Anyszka; Janusz Stepinski; Edward Darzynkiewicz; Richard E Davis
Journal:  RNA       Date:  2004-10       Impact factor: 4.942

8.  UNR, a new partner of poly(A)-binding protein, plays a key role in translationally coupled mRNA turnover mediated by the c-fos major coding-region determinant.

Authors:  Tsung-Cheng Chang; Akio Yamashita; Chyi-Ying A Chen; Yukiko Yamashita; Wenmiao Zhu; Simon Durdan; Avak Kahvejian; Nahum Sonenberg; Ann-Bin Shyu
Journal:  Genes Dev       Date:  2004-08-15       Impact factor: 11.361

9.  Respiratory deficiency mediates the regulation of CHO1-encoded phosphatidylserine synthase by mRNA stability in Saccharomyces cerevisiae.

Authors:  Hyeon-Son Choi; George M Carman
Journal:  J Biol Chem       Date:  2007-08-30       Impact factor: 5.157

Review 10.  MicroRNAs in myocardial ischemia: identifying new targets and tools for treating heart disease. New frontiers for miR-medicine.

Authors:  V Sala; S Bergerone; S Gatti; S Gallo; A Ponzetto; C Ponzetto; T Crepaldi
Journal:  Cell Mol Life Sci       Date:  2013-11-12       Impact factor: 9.261

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