Literature DB >> 19483713

Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.

K Heran Darwin1.   

Abstract

Proteasomes are ATP-dependent, multisubunit proteases that are found in all eukaryotes and archaea and some bacteria. In eukaryotes, the small protein ubiquitin is covalently attached in a post-translational manner to proteins that are targeted for proteasomal degradation. Despite the presence of proteasomes in many prokaryotes, ubiquitin or other post-translational protein modifiers were presumed to be absent from these organisms. Recently a prokaryotic ubiquitin-like protein, Pup, was found to target proteins for proteolysis by the Mycobacterium tuberculosis proteasome. The discovery of this ubiquitin-like modifier opens up the possibility that other bacteria may also have small post-translational protein tagging systems, with the ability to affect cellular processes.

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Year:  2009        PMID: 19483713      PMCID: PMC3662484          DOI: 10.1038/nrmicro2148

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  50 in total

1.  Proteasomal protein degradation in Mycobacteria is dependent upon a prokaryotic ubiquitin-like protein.

Authors:  Kristin E Burns; Wei-Ting Liu; Helena I M Boshoff; Pieter C Dorrestein; Clifton E Barry
Journal:  J Biol Chem       Date:  2008-11-21       Impact factor: 5.157

Review 2.  Urm1 at the crossroad of modifications. 'Protein Modifications: Beyond the Usual Suspects' Review Series.

Authors:  Patrick G A Pedrioli; Sebastian Leidel; Kay Hofmann
Journal:  EMBO Rep       Date:  2008-12       Impact factor: 8.807

3.  A functional proteomics approach links the ubiquitin-related modifier Urm1 to a tRNA modification pathway.

Authors:  Christian D Schlieker; Annemarthe G Van der Veen; Jadyn R Damon; Eric Spooner; Hidde L Ploegh
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-18       Impact factor: 11.205

Review 4.  To ubiquitinate or to deubiquitinate: it all depends on the partners.

Authors:  Gemma Marfany; Amanda Denuc
Journal:  Biochem Soc Trans       Date:  2008-10       Impact factor: 5.407

Review 5.  Protein partners of deubiquitinating enzymes.

Authors:  Karen H Ventii; Keith D Wilkinson
Journal:  Biochem J       Date:  2008-09-01       Impact factor: 3.857

6.  Helicobacter pylori evolution during progression from chronic atrophic gastritis to gastric cancer and its impact on gastric stem cells.

Authors:  Marios Giannakis; Swaine L Chen; Sherif M Karam; Lars Engstrand; Jeffrey I Gordon
Journal:  Proc Natl Acad Sci U S A       Date:  2008-03-10       Impact factor: 11.205

7.  E1-L2 activates both ubiquitin and FAT10.

Authors:  Yu-Hsin Chiu; Qinmiao Sun; Zhijian J Chen
Journal:  Mol Cell       Date:  2007-09-21       Impact factor: 17.970

8.  Ubiquitin-like protein involved in the proteasome pathway of Mycobacterium tuberculosis.

Authors:  Michael J Pearce; Julian Mintseris; Jessica Ferreyra; Steven P Gygi; K Heran Darwin
Journal:  Science       Date:  2008-10-02       Impact factor: 47.728

9.  Unraveling the biochemistry and provenance of pupylation: a prokaryotic analog of ubiquitination.

Authors:  Lakshminarayan M Iyer; A M Burroughs; L Aravind
Journal:  Biol Direct       Date:  2008-11-03       Impact factor: 4.540

Review 10.  Bacterial interference of ubiquitination and deubiquitination.

Authors:  Anne Rytkönen; David W Holden
Journal:  Cell Host Microbe       Date:  2007-03-15       Impact factor: 21.023

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  40 in total

1.  Analysis of ubiquitinated proteome by quantitative mass spectrometry.

Authors:  Chan Hyun Na; Junmin Peng
Journal:  Methods Mol Biol       Date:  2012

2.  A further case of Dop-ing in bacterial pupylation.

Authors:  Anja Bremm; David Komander
Journal:  EMBO Rep       Date:  2010-09-17       Impact factor: 8.807

3.  Prokaryotic ubiquitin-like protein provides a two-part degron to Mycobacterium proteasome substrates.

Authors:  Kristin E Burns; Michael J Pearce; K Heran Darwin
Journal:  J Bacteriol       Date:  2010-03-16       Impact factor: 3.490

4.  Crystal structure of the ubiquitin-like small archaeal modifier protein 2 from Haloferax volcanii.

Authors:  Yunfeng Li; Mark W Maciejewski; Jonathan Martin; Kai Jin; Yuhang Zhang; Julie A Maupin-Furlow; Bing Hao
Journal:  Protein Sci       Date:  2013-07-27       Impact factor: 6.725

5.  Structural Analysis of Mycobacterium tuberculosis Homologues of the Eukaryotic Proteasome Assembly Chaperone 2 (PAC2).

Authors:  Lin Bai; Jordan B Jastrab; Marta Isasa; Kuan Hu; Hongjun Yu; Steven P Gygi; K Heran Darwin; Huilin Li
Journal:  J Bacteriol       Date:  2017-04-11       Impact factor: 3.490

Review 6.  Adapting the machine: adaptor proteins for Hsp100/Clp and AAA+ proteases.

Authors:  Janine Kirstein; Noël Molière; David A Dougan; Kürşad Turgay
Journal:  Nat Rev Microbiol       Date:  2009-08       Impact factor: 60.633

Review 7.  The N-end rule pathway and regulation by proteolysis.

Authors:  Alexander Varshavsky
Journal:  Protein Sci       Date:  2011-08       Impact factor: 6.725

Review 8.  In-Cell NMR Spectroscopy of Intrinsically Disordered Proteins.

Authors:  Nicholas Sciolino; David S Burz; Alexander Shekhtman
Journal:  Proteomics       Date:  2019-01-15       Impact factor: 3.984

Review 9.  Contrasting persistence strategies in Salmonella and Mycobacterium.

Authors:  Anna D Tischler; John D McKinney
Journal:  Curr Opin Microbiol       Date:  2010-01-06       Impact factor: 7.934

10.  Prokaryotic ubiquitin-like protein (Pup) proteome of Mycobacterium tuberculosis [corrected] .

Authors:  Richard A Festa; Fiona McAllister; Michael J Pearce; Julian Mintseris; Kristin E Burns; Steven P Gygi; K Heran Darwin
Journal:  PLoS One       Date:  2010-01-06       Impact factor: 3.240

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