Literature DB >> 19477695

Perspectives on the DNA damage and replication checkpoint responses in Saccharomyces cerevisiae.

Christopher D Putnam1, Eric J Jaehnig, Richard D Kolodner.   

Abstract

The DNA damage and replication checkpoints are believed to primarily slow the progression of the cell cycle to allow DNA repair to occur. Here we summarize known aspects of the Saccharomyces cerevisiae checkpoints including how these responses are integrated into downstream effects on the cell cycle, chromatin, DNA repair, and cytoplasmic targets. Analysis of the transcriptional response demonstrates that it is far more complex and less relevant to the repair of DNA damage than the bacterial SOS response. We also address more speculative questions regarding potential roles of the checkpoint during the normal S-phase and how current evidence hints at a checkpoint activation mechanism mediated by positive feedback that amplifies initial damage signals above a minimum threshold.

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Year:  2009        PMID: 19477695      PMCID: PMC2725198          DOI: 10.1016/j.dnarep.2009.04.021

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  137 in total

1.  A Ddc2-Rad53 fusion protein can bypass the requirements for RAD9 and MRC1 in Rad53 activation.

Authors:  Soo-Jung Lee; Jimmy K Duong; David F Stern
Journal:  Mol Biol Cell       Date:  2004-09-29       Impact factor: 4.138

2.  Postreplicative recruitment of cohesin to double-strand breaks is required for DNA repair.

Authors:  Lena Ström; Hanna Betts Lindroos; Katsuhiko Shirahige; Camilla Sjögren
Journal:  Mol Cell       Date:  2004-12-22       Impact factor: 17.970

3.  DNA damage response pathway uses histone modification to assemble a double-strand break-specific cohesin domain.

Authors:  Elçin Unal; Ayelet Arbel-Eden; Ulrike Sattler; Robert Shroff; Michael Lichten; James E Haber; Douglas Koshland
Journal:  Mol Cell       Date:  2004-12-22       Impact factor: 17.970

4.  INO80 and gamma-H2AX interaction links ATP-dependent chromatin remodeling to DNA damage repair.

Authors:  Ashby J Morrison; Jessica Highland; Nevan J Krogan; Ayelet Arbel-Eden; Jack F Greenblatt; James E Haber; Xuetong Shen
Journal:  Cell       Date:  2004-12-17       Impact factor: 41.582

5.  Ctf7p/Eco1p exhibits acetyltransferase activity--but does it matter?

Authors:  Alex Brands; Robert V Skibbens
Journal:  Curr Biol       Date:  2005-01-26       Impact factor: 10.834

6.  Uncoupling of unwinding from DNA synthesis implies regulation of MCM helicase by Tof1/Mrc1/Csm3 checkpoint complex.

Authors:  Marina N Nedelcheva; Assen Roguev; Luben B Dolapchiev; Andrej Shevchenko; Hristo B Taskov; Anna Shevchenko; A Francis Stewart; Stoyno S Stoynov
Journal:  J Mol Biol       Date:  2005-04-01       Impact factor: 5.469

7.  Molecular anatomy and regulation of a stable replisome at a paused eukaryotic DNA replication fork.

Authors:  Arturo Calzada; Ben Hodgson; Masato Kanemaki; Avelino Bueno; Karim Labib
Journal:  Genes Dev       Date:  2005-08-15       Impact factor: 11.361

Review 8.  Strength in numbers: preventing rereplication via multiple mechanisms in eukaryotic cells.

Authors:  Emily E Arias; Johannes C Walter
Journal:  Genes Dev       Date:  2007-03-01       Impact factor: 11.361

9.  Recruitment of the INO80 complex by H2A phosphorylation links ATP-dependent chromatin remodeling with DNA double-strand break repair.

Authors:  Haico van Attikum; Olivier Fritsch; Barbara Hohn; Susan M Gasser
Journal:  Cell       Date:  2004-12-17       Impact factor: 41.582

10.  The DNA damage checkpoint response requires histone H2B ubiquitination by Rad6-Bre1 and H3 methylation by Dot1.

Authors:  Michele Giannattasio; Federico Lazzaro; Paolo Plevani; Marco Muzi-Falconi
Journal:  J Biol Chem       Date:  2005-01-04       Impact factor: 5.157

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  46 in total

Review 1.  Mechanisms and regulation of DNA end resection.

Authors:  Maria Pia Longhese; Diego Bonetti; Nicola Manfrini; Michela Clerici
Journal:  EMBO J       Date:  2010-07-20       Impact factor: 11.598

2.  Phenotypic checkpoints regulate neuronal development.

Authors:  Yehezkel Ben-Ari; Nicholas C Spitzer
Journal:  Trends Neurosci       Date:  2010-09-21       Impact factor: 13.837

3.  Shrinking Daughters: Rlm1-Dependent G1/S Checkpoint Maintains Saccharomyces cerevisiae Daughter Cell Size and Viability.

Authors:  Sarah Piccirillo; Deepshikha Neog; David Spade; J David Van Horn; LeAnn M Tiede-Lewis; Sarah L Dallas; Tamas Kapros; Saul M Honigberg
Journal:  Genetics       Date:  2017-06-21       Impact factor: 4.562

4.  Extensive DNA damage-induced sumoylation contributes to replication and repair and acts in addition to the mec1 checkpoint.

Authors:  Catherine A Cremona; Prabha Sarangi; Yan Yang; Lisa E Hang; Sadia Rahman; Xiaolan Zhao
Journal:  Mol Cell       Date:  2012-01-26       Impact factor: 17.970

5.  Analysis of replication profiles reveals key role of RFC-Ctf18 in yeast replication stress response.

Authors:  Laure Crabbé; Aubin Thomas; Véronique Pantesco; John De Vos; Philippe Pasero; Armelle Lengronne
Journal:  Nat Struct Mol Biol       Date:  2010-10-24       Impact factor: 15.369

6.  Rap1 relocalization contributes to the chromatin-mediated gene expression profile and pace of cell senescence.

Authors:  Jesse M Platt; Paul Ryvkin; Jennifer J Wanat; Greg Donahue; M Dan Ricketts; Steven P Barrett; Hannah J Waters; Shufei Song; Alejandro Chavez; Khaled Omar Abdallah; Stephen R Master; Li-San Wang; F Brad Johnson
Journal:  Genes Dev       Date:  2013-06-11       Impact factor: 11.361

7.  The checkpoint transcriptional response: make sure to turn it off once you are satisfied.

Authors:  Marcus B Smolka; Francisco M Bastos de Oliveira; Michael R Harris; Robertus A M de Bruin
Journal:  Cell Cycle       Date:  2012-08-16       Impact factor: 4.534

8.  DNA damage checkpoint triggers autophagy to regulate the initiation of anaphase.

Authors:  Farokh Dotiwala; Vinay V Eapen; Jacob C Harrison; Ayelet Arbel-Eden; Vikram Ranade; Satoshi Yoshida; James E Haber
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-19       Impact factor: 11.205

9.  Post-replication repair suppresses duplication-mediated genome instability.

Authors:  Christopher D Putnam; Tikvah K Hayes; Richard D Kolodner
Journal:  PLoS Genet       Date:  2010-05-06       Impact factor: 5.917

10.  The MRX complex plays multiple functions in resection of Yku- and Rif2-protected DNA ends.

Authors:  Diego Bonetti; Michela Clerici; Nicola Manfrini; Giovanna Lucchini; Maria Pia Longhese
Journal:  PLoS One       Date:  2010-11-30       Impact factor: 3.240

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