Literature DB >> 19467627

The pH dependence of the allosteric response of human liver pyruvate kinase to fructose-1,6-bisphosphate, ATP, and alanine.

Aron W Fenton1, Myra Hutchinson.   

Abstract

The allosteric regulation of human liver pyruvate kinase (hL-PYK) by fructose-1,6-bisphosphate (Fru-1,6-BP; activator), ATP (inhibitor) and alanine (Ala; inhibitor) was monitored over a pH range from 6.5 to 8.0 at 37 degrees C. As a function of increasing pH, hL-PYK's affinity for the substrate phosphoenolpyruvate (PEP), and for Fru-1,6-BP decreases, while affinities for ATP and alanine slightly increases. At pH 6.5, Fru-1,6-BP and ATP elicit only small allosteric impacts on PEP affinity. As pH increases, Fru-1,6-BP and ATP elicit greater allosteric responses, but the response to alanine is relatively constant. Since the magnitudes of the allosteric coupling for ATP and for alanine inhibition are different and the pH dependences of these magnitudes are not similar, these inhibitors likely elicit their responses using different molecular mechanisms. In addition, our results fail to support a general correlation between pH dependent changes in effector affinity and pH dependent changes in the corresponding allosteric response.

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Year:  2009        PMID: 19467627      PMCID: PMC2687410          DOI: 10.1016/j.abb.2009.01.011

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  48 in total

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Journal:  Appl Microbiol Biotechnol       Date:  2003-06-12       Impact factor: 4.813

3.  Effect of a pyruvate kinase (pykF-gene) knockout mutation on the control of gene expression and metabolic fluxes in Escherichia coli.

Authors:  Khandaker Al Zaid Siddiquee; Marcos J Arauzo-Bravo; Kazuyuki Shimizu
Journal:  FEMS Microbiol Lett       Date:  2004-06-01       Impact factor: 2.742

4.  Quantitative analysis and interpretation of allosteric behavior.

Authors:  Gregory D Reinhart
Journal:  Methods Enzymol       Date:  2004       Impact factor: 1.600

5.  Isolation of a single activating allosteric interaction in phosphofructokinase from Escherichia coli.

Authors:  Aron W Fenton; Gregory D Reinhart
Journal:  Biochemistry       Date:  2002-11-12       Impact factor: 3.162

6.  Metabolic flux responses to pyruvate kinase knockout in Escherichia coli.

Authors:  Marcel Emmerling; Michael Dauner; Aaron Ponti; Jocelyne Fiaux; Michel Hochuli; Thomas Szyperski; Kurt Wüthrich; J E Bailey; Uwe Sauer
Journal:  J Bacteriol       Date:  2002-01       Impact factor: 3.490

7.  Human erythrocyte pyruvate kinase: characterization of the recombinant enzyme and a mutant form (R510Q) causing nonspherocytic hemolytic anemia.

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Journal:  Blood       Date:  2001-11-15       Impact factor: 22.113

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Authors:  Ma Enriqueta Muñoz; Elizabeth Ponce
Journal:  Comp Biochem Physiol B Biochem Mol Biol       Date:  2003-06       Impact factor: 2.231

9.  Structure and function of human erythrocyte pyruvate kinase. Molecular basis of nonspherocytic hemolytic anemia.

Authors:  Giovanna Valentini; Laurent R Chiarelli; Riccardo Fortin; Manuela Dolzan; Alessandro Galizzi; Donald J Abraham; Changqing Wang; Paola Bianchi; Alberto Zanella; Andrea Mattevi
Journal:  J Biol Chem       Date:  2002-04-17       Impact factor: 5.157

Review 10.  Allostery: an illustrated definition for the 'second secret of life'.

Authors:  Aron W Fenton
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  21 in total

1.  Whole-protein alanine-scanning mutagenesis of allostery: A large percentage of a protein can contribute to mechanism.

Authors:  Qingling Tang; Aron W Fenton
Journal:  Hum Mutat       Date:  2017-06-16       Impact factor: 4.878

2.  Chokepoints in Mechanical Coupling Associated with Allosteric Proteins: The Pyruvate Kinase Example.

Authors:  Lewis E Johnson; Bojana Ginovska; Aron W Fenton; Simone Raugei
Journal:  Biophys J       Date:  2019-04-02       Impact factor: 4.033

3.  RheoScale: A tool to aggregate and quantify experimentally determined substitution outcomes for multiple variants at individual protein positions.

Authors:  Abby M Hodges; Aron W Fenton; Larissa L Dougherty; Andrew C Overholt; Liskin Swint-Kruse
Journal:  Hum Mutat       Date:  2018-08-28       Impact factor: 4.878

4.  Distinguishing the interactions in the fructose 1,6-bisphosphate binding site of human liver pyruvate kinase that contribute to allostery.

Authors:  Arjun Ishwar; Qingling Tang; Aron W Fenton
Journal:  Biochemistry       Date:  2015-02-12       Impact factor: 3.162

5.  Identification of allosteric-activating drug leads for human liver pyruvate kinase.

Authors:  Aron W Fenton
Journal:  Methods Mol Biol       Date:  2012

6.  Allosteric regulation of human liver pyruvate kinase by peptides that mimic the phosphorylated/dephosphorylated N-terminus.

Authors:  Charulata B Prasannan; Qingling Tang; Aron W Fenton
Journal:  Methods Mol Biol       Date:  2012

7.  The phosphate moiety of phosphoenolpyruvate does NOT contribute to allosteric regulation of liver pyruvate kinase by fructose-1,6-bisphosphate.

Authors:  Benjamin M Chappell; Aron W Fenton
Journal:  Arch Biochem Biophys       Date:  2020-10-16       Impact factor: 4.013

8.  Changes in the allosteric site of human liver pyruvate kinase upon activator binding include the breakage of an intersubunit cation-π bond.

Authors:  Jeffrey S McFarlane; Trey A Ronnebaum; Kathleen M Meneely; Annemarie Chilton; Aron W Fenton; Audrey L Lamb
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2019-06-10       Impact factor: 1.056

9.  The impact of ions on allosteric functions in human liver pyruvate kinase.

Authors:  Aron W Fenton; Aileen Y Alontaga
Journal:  Methods Enzymol       Date:  2009-11-13       Impact factor: 1.600

Review 10.  A critical review of the role of M2PYK in the Warburg effect.

Authors:  Robert A Harris; Aron W Fenton
Journal:  Biochim Biophys Acta Rev Cancer       Date:  2019-01-29       Impact factor: 10.680

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