Literature DB >> 19631652

Functional analysis of putative operons in Brugia malayi.

Canhui Liu1, Ana Oliveira, Chitra Chauhan, Elodie Ghedin, Thomas R Unnasch.   

Abstract

Operons are a common mode of gene organization in Caenorhabditis elegans. Similar gene arrangements suggest that functional operons may exist in Brugia malayi. To definitively test this hypothesis, a bicistronic reporter vector consisting of an upstream firefly luciferase gene and a downstream renilla luciferase gene was constructed. The genome was then surveyed to identify 15 gene pairs that were likely to represent operons. Two of four domains upstream of the 5' gene from these clusters exhibited promoter activity. When constructs replicating the promoter and intergenic arrangement found in the native putative operon were transfected into embryos, both firefly and renilla activities were detected, while constructs with the promoter alone or intergenic region alone produced no activity from the downstream reporter. These data confirm that functional operons exist in B. malayi. Mutation of three U-rich element homologues present in one of the operons resulted in a decrease in downstream renilla reporter activity, suggesting that these were important in mRNA maturation. Hemi-nested reverse transcriptase-PCR assays demonstrated that while the mRNA encoding the native downstream open reading frame of one operon contained an SL1 spliced leader at its 5' end, the renilla gene mRNA produced from the corresponding transgenic construct did not. Copyright 2009 Australian Society for Parasitology Inc. Published by Elsevier Ltd. All rights reserved.

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Year:  2009        PMID: 19631652      PMCID: PMC2813416          DOI: 10.1016/j.ijpara.2009.07.001

Source DB:  PubMed          Journal:  Int J Parasitol        ISSN: 0020-7519            Impact factor:   3.981


  19 in total

1.  Intercistronic region required for polycistronic pre-mRNA processing in Caenorhabditis elegans.

Authors:  T Huang; S Kuersten; A M Deshpande; J Spieth; M MacMorris; T Blumenthal
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

2.  Intron encoded sequences necessary for trans splicing in transiently transfected Brugia malayi.

Authors:  Tarig B Higazi; Thomas R Unnasch
Journal:  Mol Biochem Parasitol       Date:  2004-09       Impact factor: 1.759

Review 3.  Re-assessing the global prevalence and distribution of lymphatic filariasis.

Authors:  E Michael; D A Bundy; B T Grenfell
Journal:  Parasitology       Date:  1996-04       Impact factor: 3.234

4.  SL1 trans splicing and 3'-end formation in a novel class of Caenorhabditis elegans operon.

Authors:  C Williams; L Xu; T Blumenthal
Journal:  Mol Cell Biol       Date:  1999-01       Impact factor: 4.272

5.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

6.  Operons in C. elegans: polycistronic mRNA precursors are processed by trans-splicing of SL2 to downstream coding regions.

Authors:  J Spieth; G Brooke; S Kuersten; K Lea; T Blumenthal
Journal:  Cell       Date:  1993-05-07       Impact factor: 41.582

7.  Analysis of the Brugia malayi HSP70 promoter using a homologous transient transfection system.

Authors:  Limin Shu; Charles R Katholi; Tarig Higazi; Thomas R Unnasch
Journal:  Mol Biochem Parasitol       Date:  2003-04-25       Impact factor: 1.759

8.  Operons as a common form of chromosomal organization in C. elegans.

Authors:  D A Zorio; N N Cheng; T Blumenthal; J Spieth
Journal:  Nature       Date:  1994-11-17       Impact factor: 49.962

9.  A global analysis of Caenorhabditis elegans operons.

Authors:  Thomas Blumenthal; Donald Evans; Christopher D Link; Alessandro Guffanti; Daniel Lawson; Jean Thierry-Mieg; Danielle Thierry-Mieg; Wei Lu Chiu; Kyle Duke; Moni Kiraly; Stuart K Kim
Journal:  Nature       Date:  2002-06-20       Impact factor: 49.962

10.  The splice leader addition domain represents an essential conserved motif for heterologous gene expression in B. malayi.

Authors:  Canhui Liu; Chitra Chauhan; Charles R Katholi; Thomas R Unnasch
Journal:  Mol Biochem Parasitol       Date:  2009-02-24       Impact factor: 1.759

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2.  Annotation of two large contiguous regions from the Haemonchus contortus genome using RNA-seq and comparative analysis with Caenorhabditis elegans.

Authors:  Roz Laing; Martin Hunt; Anna V Protasio; Gary Saunders; Karen Mungall; Steven Laing; Frank Jackson; Michael Quail; Robin Beech; Matthew Berriman; John S Gilleard
Journal:  PLoS One       Date:  2011-08-15       Impact factor: 3.240

3.  Incorporation of a horizontally transferred gene into an operon during cnidarian evolution.

Authors:  Catherine E Dana; Kristine M Glauber; Titus A Chan; Diane M Bridge; Robert E Steele
Journal:  PLoS One       Date:  2012-02-06       Impact factor: 3.240

Review 4.  Rendering the Intractable More Tractable: Tools from Caenorhabditis elegans Ripe for Import into Parasitic Nematodes.

Authors:  Jordan D Ward
Journal:  Genetics       Date:  2015-12       Impact factor: 4.562

5.  Operons are a conserved feature of nematode genomes.

Authors:  Jonathan Pettitt; Lucas Philippe; Debjani Sarkar; Christopher Johnston; Henrike Johanna Gothe; Diane Massie; Bernadette Connolly; Berndt Müller
Journal:  Genetics       Date:  2014-06-14       Impact factor: 4.562

Review 6.  CRISPR/Cas9 Mutagenesis and Expression of Dominant Mutant Transgenes as Functional Genomic Approaches in Parasitic Nematodes.

Authors:  James B Lok
Journal:  Front Genet       Date:  2019-07-16       Impact factor: 4.599

7.  Long-read RNA sequencing of human and animal filarial parasites improves gene models and discovers operons.

Authors:  Nicolas J Wheeler; Paul M Airs; Mostafa Zamanian
Journal:  PLoS Negl Trop Dis       Date:  2020-11-16
  7 in total

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