Literature DB >> 19419178

Image analysis with rapid and accurate two-dimensional Gaussian fitting.

Stephen M Anthony1, Steve Granick.   

Abstract

A computationally rapid image analysis method, weighted overdetermined regression, is presented for two-dimensional (2D) Gaussian fitting of particle location with subpixel resolution from a pixelized image of light intensity. Compared to least-squares Gaussian iterative fitting, which is most exact but prohibitively slow for large data sets, the precision of this new method is equivalent when the signal-to-noise ratio is high and approaches it when the signal-to-noise ratio is low, while enjoying a more than 100-fold improvement in computational time. Compared to another widely used approximation method, nine-point regression, we show that precision and speed are both improved. Additionally, weighted regression runs nearly as fast and with greatly improved precision compared to the simplest method, the moment method, which, despite its limited precision, is frequently employed because of its speed. Quantitative comparisons are presented for both circular and elliptical Gaussian intensity distributions. This new image analysis method may be useful when dealing with large data sets such as those frequently met in astronomy or in single-particle and single-molecule tracking using microscopy and may facilitate advances such as real-time quantification of microscopy images.

Year:  2009        PMID: 19419178     DOI: 10.1021/la900393v

Source DB:  PubMed          Journal:  Langmuir        ISSN: 0743-7463            Impact factor:   3.882


  15 in total

1.  Rapid, accurate particle tracking by calculation of radial symmetry centers.

Authors:  Raghuveer Parthasarathy
Journal:  Nat Methods       Date:  2012-06-10       Impact factor: 28.547

2.  Quantitative evaluation of software packages for single-molecule localization microscopy.

Authors:  Daniel Sage; Hagai Kirshner; Thomas Pengo; Nico Stuurman; Junhong Min; Suliana Manley; Michael Unser
Journal:  Nat Methods       Date:  2015-06-15       Impact factor: 28.547

3.  Defective Transcytosis of APP and Lipoproteins in Human iPSC-Derived Neurons with Familial Alzheimer's Disease Mutations.

Authors:  Grace Woodruff; Sol M Reyna; Mariah Dunlap; Rik Van Der Kant; Julia A Callender; Jessica E Young; Elizabeth A Roberts; Lawrence S B Goldstein
Journal:  Cell Rep       Date:  2016-10-11       Impact factor: 9.423

4.  Improved analysis for determining diffusion coefficients from short, single-molecule trajectories with photoblinking.

Authors:  Bo Shuang; Chad P Byers; Lydia Kisley; Lin-Yung Wang; Julia Zhao; Hiroyuki Morimura; Stephan Link; Christy F Landes
Journal:  Langmuir       Date:  2012-12-20       Impact factor: 3.882

5.  Joint Estimation of Trajectory and Model Parameters for Single Particle Tracking of 3D Confined Diffusion Using the Double-Helix Point Spread Function.

Authors:  Ye Lin; Fatemeh Sharifi; Sean B Andersson
Journal:  Proc IFAC World Congress       Date:  2021-09-15

6.  Strain coupling of ferroelastic domains and misfit dislocations in [101]-oriented ferroelectric PbTiO3 films.

Authors:  Y P Feng; R J Jiang; Y L Zhu; Y L Tang; Y J Wang; M J Zou; W R Geng; X L Ma
Journal:  RSC Adv       Date:  2022-07-14       Impact factor: 4.036

Review 7.  Troika of single particle tracking programing: SNR enhancement, particle identification, and mapping.

Authors:  Bo Shuang; Jixin Chen; Lydia Kisley; Christy F Landes
Journal:  Phys Chem Chem Phys       Date:  2014-01-14       Impact factor: 3.676

8.  HybTrack: A hybrid single particle tracking software using manual and automatic detection of dim signals.

Authors:  Byung Hun Lee; Hye Yoon Park
Journal:  Sci Rep       Date:  2018-01-09       Impact factor: 4.379

9.  Atomic-scale mapping of dipole frustration at 90° charged domain walls in ferroelectric PbTiO3 films.

Authors:  Y L Tang; Y L Zhu; Y J Wang; W Y Wang; Y B Xu; W J Ren; Z D Zhang; X L Ma
Journal:  Sci Rep       Date:  2014-02-18       Impact factor: 4.379

10.  Atomic mapping of Ruddlesden-Popper faults in transparent conducting BaSnO3-based thin films.

Authors:  W Y Wang; Y L Tang; Y L Zhu; J Suriyaprakash; Y B Xu; Y Liu; B Gao; S-W Cheong; X L Ma
Journal:  Sci Rep       Date:  2015-11-03       Impact factor: 4.379

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