Literature DB >> 19410543

RAD6-Mediated transcription-coupled H2B ubiquitylation directly stimulates H3K4 methylation in human cells.

Jaehoon Kim1, Mohamed Guermah, Robert K McGinty, Jung-Shin Lee, Zhanyun Tang, Thomas A Milne, Ali Shilatifard, Tom W Muir, Robert G Roeder.   

Abstract

H2B ubiquitylation has been implicated in active transcription but is not well understood in mammalian cells. Beyond earlier identification of hBRE1 as the E3 ligase for H2B ubiquitylation in human cells, we now show (1) that hRAD6 serves as the cognate E2-conjugating enzyme; (2) that hRAD6, through direct interaction with hPAF-bound hBRE1, is recruited to transcribed genes and ubiquitylates chromatinized H2B at lysine 120; (3) that hPAF-mediated transcription is required for efficient H2B ubiquitylation as a result of hPAF-dependent recruitment of hBRE1-hRAD6 to the Pol II transcription machinery; (4) that H2B ubiquitylation per se does not affect the level of hPAF-, SII-, and p300-dependent transcription and likely functions downstream; and (5) that H2B ubiquitylation directly stimulates hSET1-dependent H3K4 di- and trimethylation. These studies establish the natural H2B ubiquitylation factors in human cells and also detail the mechanistic basis for H2B ubiquitylation and function during transcription.

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Year:  2009        PMID: 19410543      PMCID: PMC2678028          DOI: 10.1016/j.cell.2009.02.027

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  32 in total

1.  The E2-E3 interaction in the N-end rule pathway: the RING-H2 finger of E3 is required for the synthesis of multiubiquitin chain.

Authors:  Y Xie; A Varshavsky
Journal:  EMBO J       Date:  1999-12-01       Impact factor: 11.598

2.  Recruitment of a 19S proteasome subcomplex to an activated promoter.

Authors:  Fernando Gonzalez; Agnes Delahodde; Thomas Kodadek; Stephen Albert Johnston
Journal:  Science       Date:  2002-04-19       Impact factor: 47.728

3.  Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity.

Authors:  Huck Hui Ng; François Robert; Richard A Young; Kevin Struhl
Journal:  Mol Cell       Date:  2003-03       Impact factor: 17.970

4.  The Paf1 complex is required for histone H3 methylation by COMPASS and Dot1p: linking transcriptional elongation to histone methylation.

Authors:  Nevan J Krogan; Jim Dover; Adam Wood; Jessica Schneider; Jonathan Heidt; Marry Ann Boateng; Kimberly Dean; Owen W Ryan; Ashkan Golshani; Mark Johnston; Jack F Greenblatt; Ali Shilatifard
Journal:  Mol Cell       Date:  2003-03       Impact factor: 17.970

5.  The Rtf1 component of the Paf1 transcriptional elongation complex is required for ubiquitination of histone H2B.

Authors:  Huck Hui Ng; Sudhanshu Dole; Kevin Struhl
Journal:  J Biol Chem       Date:  2003-07-21       Impact factor: 5.157

6.  The Paf1 complex is essential for histone monoubiquitination by the Rad6-Bre1 complex, which signals for histone methylation by COMPASS and Dot1p.

Authors:  Adam Wood; Jessica Schneider; Jim Dover; Mark Johnston; Ali Shilatifard
Journal:  J Biol Chem       Date:  2003-07-21       Impact factor: 5.157

7.  H2B ubiquitylation plays a role in nucleosome dynamics during transcription elongation.

Authors:  Alastair B Fleming; Cheng-Fu Kao; Cory Hillyer; Michael Pikaart; Mary Ann Osley
Journal:  Mol Cell       Date:  2008-07-11       Impact factor: 17.970

8.  The novel human DNA helicase hFBH1 is an F-box protein.

Authors:  Jaehoon Kim; Jeong-Hoon Kim; Sung-Hak Lee; Do-Hyung Kim; Ho-Young Kang; Sung-Ho Bae; Zhen-Qiang Pan; Yeon-Soo Seo
Journal:  J Biol Chem       Date:  2002-04-15       Impact factor: 5.157

9.  Ubiquitination of histone H2B regulates H3 methylation and gene silencing in yeast.

Authors:  Zu-Wen Sun; C David Allis
Journal:  Nature       Date:  2002-06-23       Impact factor: 49.962

10.  Methylation of histone H3 by COMPASS requires ubiquitination of histone H2B by Rad6.

Authors:  Jim Dover; Jessica Schneider; Mary Anne Tawiah-Boateng; Adam Wood; Kimberly Dean; Mark Johnston; Ali Shilatifard
Journal:  J Biol Chem       Date:  2002-06-17       Impact factor: 5.157

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  245 in total

Review 1.  The COMPASS family of histone H3K4 methylases: mechanisms of regulation in development and disease pathogenesis.

Authors:  Ali Shilatifard
Journal:  Annu Rev Biochem       Date:  2012       Impact factor: 23.643

2.  Enzymatic assays for assessing histone deubiquitylation activity.

Authors:  Robyn T Sussman; Xiao-Yong Zhang; Steven B McMahon
Journal:  Methods       Date:  2011-04-12       Impact factor: 3.608

Review 3.  Ubiquitin and proteasomes in transcription.

Authors:  Fuqiang Geng; Sabine Wenzel; William P Tansey
Journal:  Annu Rev Biochem       Date:  2012-03-08       Impact factor: 23.643

Review 4.  Trithorax group proteins: switching genes on and keeping them active.

Authors:  Bernd Schuettengruber; Anne-Marie Martinez; Nicola Iovino; Giacomo Cavalli
Journal:  Nat Rev Mol Cell Biol       Date:  2011-11-23       Impact factor: 94.444

5.  Genome-wide function of H2B ubiquitylation in promoter and genic regions.

Authors:  Kiran Batta; Zhenhai Zhang; Kuangyu Yen; David B Goffman; B Franklin Pugh
Journal:  Genes Dev       Date:  2011-11-01       Impact factor: 11.361

6.  Dynamic loss of H2B ubiquitylation without corresponding changes in H3K4 trimethylation during myogenic differentiation.

Authors:  Vasupradha Vethantham; Yan Yang; Christopher Bowman; Patrik Asp; Jeong-Heon Lee; David G Skalnik; Brian D Dynlacht
Journal:  Mol Cell Biol       Date:  2012-01-17       Impact factor: 4.272

Review 7.  Inducible gene expression: diverse regulatory mechanisms.

Authors:  Vikki M Weake; Jerry L Workman
Journal:  Nat Rev Genet       Date:  2010-04-27       Impact factor: 53.242

8.  Regulation of histone H2A and H2B deubiquitination and Xenopus development by USP12 and USP46.

Authors:  Heui-Yun Joo; Amada Jones; Chunying Yang; Ling Zhai; Archer D Smith; Zhuo Zhang; Mahesh B Chandrasekharan; Zu-wen Sun; Matthew B Renfrow; Yanming Wang; Chenbei Chang; Hengbin Wang
Journal:  J Biol Chem       Date:  2010-12-23       Impact factor: 5.157

9.  Histone H3R2 symmetric dimethylation and histone H3K4 trimethylation are tightly correlated in eukaryotic genomes.

Authors:  Chih-Chi Yuan; Adam G W Matthews; Yi Jin; Chang Feng Chen; Brad A Chapman; Toshiro K Ohsumi; Karen C Glass; Tatiana G Kutateladze; Mark L Borowsky; Kevin Struhl; Marjorie A Oettinger
Journal:  Cell Rep       Date:  2012-02-23       Impact factor: 9.423

Review 10.  Structural basis for H3K4 trimethylation by yeast Set1/COMPASS.

Authors:  Yoh-Hei Takahashi; Ali Shilatifard
Journal:  Adv Enzyme Regul       Date:  2009-12-18
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