Literature DB >> 19407816

The picobirnavirus crystal structure provides functional insights into virion assembly and cell entry.

Stéphane Duquerroy1, Bruno Da Costa, Céline Henry, Armelle Vigouroux, Sonia Libersou, Jean Lepault, Jorge Navaza, Bernard Delmas, Félix A Rey.   

Abstract

Double-stranded (ds) RNA virus particles are organized around a central icosahedral core capsid made of 120 identical subunits. This core capsid is unable to invade cells from outside, and animal dsRNA viruses have acquired surrounding capsid layers that are used to deliver a transcriptionally active core particle across the membrane during cell entry. In contrast, dsRNA viruses infecting primitive eukaryotes have only a simple core capsid, and as a consequence are transmitted only vertically. Here, we report the 3.4 A X-ray structure of a picobirnavirus--an animal dsRNA virus associated with diarrhoea and gastroenteritis in humans. The structure shows a simple core capsid with a distinctive icosahedral arrangement, displaying 60 two-fold symmetric dimers of a coat protein (CP) with a new 3D-fold. We show that, as many non-enveloped animal viruses, CP undergoes an autoproteolytic cleavage, releasing a post-translationally modified peptide that remains associated with nucleic acid within the capsid. Our data also show that picobirnavirus particles are capable of disrupting biological membranes in vitro, indicating that its simple 120-subunits capsid has evolved animal cell invasion properties.

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Year:  2009        PMID: 19407816      PMCID: PMC2693148          DOI: 10.1038/emboj.2009.109

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  51 in total

1.  EMAN: semiautomated software for high-resolution single-particle reconstructions.

Authors:  S J Ludtke; P R Baldwin; W Chiu
Journal:  J Struct Biol       Date:  1999-12-01       Impact factor: 2.867

2.  Methods for reconstructing density maps of "single" particles from cryoelectron micrographs to subnanometer resolution.

Authors:  J F Conway; A C Steven
Journal:  J Struct Biol       Date:  1999-12-01       Impact factor: 2.867

3.  Peptides released from reovirus outer capsid form membrane pores that recruit virus particles.

Authors:  Tijana Ivanovic; Melina A Agosto; Lan Zhang; Kartik Chandran; Stephen C Harrison; Max L Nibert
Journal:  EMBO J       Date:  2008-03-27       Impact factor: 11.598

4.  The atomic structure of the bluetongue virus core.

Authors:  J M Grimes; J N Burroughs; P Gouet; J M Diprose; R Malby; S Ziéntara; P P Mertens; D I Stuart
Journal:  Nature       Date:  1998-10-01       Impact factor: 49.962

Review 5.  What does structure tell us about virus evolution?

Authors:  Dennis H Bamford; Jonathan M Grimes; David I Stuart
Journal:  Curr Opin Struct Biol       Date:  2005-11-03       Impact factor: 6.809

6.  Picobirnavirus (PBV) natural hosts in captivity and virus excretion pattern in infected animals.

Authors:  G Masachessi; L C Martínez; M O Giordano; P A Barril; B M Isa; L Ferreyra; D Villareal; M Carello; C Asis; S V Nates
Journal:  Arch Virol       Date:  2007-01-25       Impact factor: 2.574

7.  Mechanism of capsid assembly for an icosahedral plant virus.

Authors:  A Zlotnick; R Aldrich; J M Johnson; P Ceres; M J Young
Journal:  Virology       Date:  2000-11-25       Impact factor: 3.616

Review 8.  Enteric viruses and diarrhea in HIV-infected patients. Enteric Opportunistic Infections Working Group.

Authors:  G S Grohmann; R I Glass; H G Pereira; S S Monroe; A W Hightower; R Weber; R T Bryan
Journal:  N Engl J Med       Date:  1993-07-01       Impact factor: 91.245

9.  The atomic structure of rice dwarf virus reveals the self-assembly mechanism of component proteins.

Authors:  Atsushi Nakagawa; Naoyuki Miyazaki; Junichiro Taka; Hisashi Naitow; Akira Ogawa; Zui Fujimoto; Hiroshi Mizuno; Takahiko Higashi; Yasuo Watanabe; Toshihiro Omura; R Holland Cheng; Tomitake Tsukihara
Journal:  Structure       Date:  2003-10       Impact factor: 5.006

Review 10.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14
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  36 in total

1.  Backbone trace of partitivirus capsid protein from electron cryomicroscopy and homology modeling.

Authors:  Jinghua Tang; Junhua Pan; Wendy M Havens; Wendy F Ochoa; Tom S Y Guu; Said A Ghabrial; Max L Nibert; Yizhi Jane Tao; Timothy S Baker
Journal:  Biophys J       Date:  2010-07-21       Impact factor: 4.033

2.  The T=1 capsid protein of Penicillium chrysogenum virus is formed by a repeated helix-rich core indicative of gene duplication.

Authors:  Daniel Luque; José M González; Damiá Garriga; Said A Ghabrial; Wendy M Havens; Benes Trus; Nuria Verdaguer; José L Carrascosa; José R Castón
Journal:  J Virol       Date:  2010-05-12       Impact factor: 5.103

Review 3.  Cell Walls and the Convergent Evolution of the Viral Envelope.

Authors:  Jan P Buchmann; Edward C Holmes
Journal:  Microbiol Mol Biol Rev       Date:  2015-12       Impact factor: 11.056

4.  Human picobirnaviruses identified by molecular screening of diarrhea samples.

Authors:  Marije van Leeuwen; Marisol M W Williams; Penelope Koraka; James H Simon; Saskia L Smits; Albert D M E Osterhaus
Journal:  J Clin Microbiol       Date:  2010-03-24       Impact factor: 5.948

5.  Cryphonectria nitschkei virus 1 structure shows that the capsid protein of chrysoviruses is a duplicated helix-rich fold conserved in fungal double-stranded RNA viruses.

Authors:  Josué Gómez-Blanco; Daniel Luque; José M González; José L Carrascosa; Carlos Alfonso; Benes Trus; Wendy M Havens; Said A Ghabrial; José R Castón
Journal:  J Virol       Date:  2012-05-16       Impact factor: 5.103

6.  Structure of RNA polymerase complex and genome within a dsRNA virus provides insights into the mechanisms of transcription and assembly.

Authors:  Xurong Wang; Fuxian Zhang; Rui Su; Xiaowu Li; Wenyuan Chen; Qingxiu Chen; Tao Yang; Jiawei Wang; Hongrong Liu; Qin Fang; Lingpeng Cheng
Journal:  Proc Natl Acad Sci U S A       Date:  2018-06-25       Impact factor: 11.205

7.  Cryo-electron Microscopy Structure, Assembly, and Mechanics Show Morphogenesis and Evolution of Human Picobirnavirus.

Authors:  Álvaro Ortega-Esteban; Carlos P Mata; María J Rodríguez-Espinosa; Daniel Luque; Nerea Irigoyen; Javier M Rodríguez; Pedro J de Pablo; José R Castón
Journal:  J Virol       Date:  2020-11-23       Impact factor: 5.103

Review 8.  3D structures of fungal partitiviruses.

Authors:  Max L Nibert; Jinghua Tang; Jiatao Xie; Aaron M Collier; Said A Ghabrial; Timothy S Baker; Yizhi J Tao
Journal:  Adv Virus Res       Date:  2013       Impact factor: 9.937

9.  RNA virus replication complexes.

Authors:  Yizhi Jane Tao; Qiaozhen Ye
Journal:  PLoS Pathog       Date:  2010-07-22       Impact factor: 6.823

10.  Detection and molecular characterization of porcine picobirnavirus in feces of domestic pigs from kolkata, India.

Authors:  Balasubramanian Ganesh; Krisztián Bányai; Suman Kanungo; Deepika Sur; Yashpal Singh Malik; Nobumichi Kobayashi
Journal:  Indian J Virol       Date:  2012-09-18
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