Literature DB >> 19404438

Light sheet-based fluorescence microscopy: more dimensions, more photons, and less photodamage.

Emmanuel G Reynaud1, Uros Krzic, Klaus Greger, Ernst H K Stelzer.   

Abstract

Light-sheet-based fluorescence microscopy (LSFM) is a fluorescence technique that combines optical sectioning, the key capability of confocal and two-photon fluorescence microscopes with multiple-view imaging, which is used in optical tomography. In contrast to conventional wide-field and confocal fluorescence microscopes, a light sheet illuminates only the focal plane of the detection objective lens from the side. Excitation is, thus, restricted to the fluorophores in the volume near the focal plane. This provides optical sectioning and allows the use of regular cameras in the detection process. Compared to confocal fluorescence microscopy, LSFM reduces photo bleaching and photo toxicity by up to three orders of magnitude. In LSFM, the specimen is embedded in a transparent block of hydrogel and positioned relative to the stationary light sheet using precise motorized translation and rotation stages. This feature is used to image any plane in a specimen. Additionally, multiple views obtained along different angles can be combined into a single data set with an improved resolution. LSFMs are very well suited for imaging large live specimens over long periods of time. However, they also perform well with very small specimens such as single yeast cells. This perspective introduces the principles of LSFM, explains the challenges of specimen preparation, and introduces the basics of a microscopy that takes advantage of multiple views.

Entities:  

Year:  2008        PMID: 19404438      PMCID: PMC2639947          DOI: 10.2976/1.2974980

Source DB:  PubMed          Journal:  HFSP J        ISSN: 1955-205X


  25 in total

1.  3D light scanning macrography.

Authors:  D Huber; M Keller; D Robert
Journal:  J Microsc       Date:  2001-08       Impact factor: 1.758

2.  Optical sectioning deep inside live embryos by selective plane illumination microscopy.

Authors:  Jan Huisken; Jim Swoger; Filippo Del Bene; Joachim Wittbrodt; Ernst H K Stelzer
Journal:  Science       Date:  2004-08-13       Impact factor: 47.728

3.  In vivo selective cytoskeleton dynamics quantification in interphase cells induced by pulsed ultraviolet laser nanosurgery.

Authors:  Julien Colombelli; Emmanuel G Reynaud; Jens Rietdorf; Rainer Pepperkok; Ernst H K Stelzer
Journal:  Traffic       Date:  2005-12       Impact factor: 6.215

Review 4.  [Laser nanosurgery in cell biology].

Authors:  Julien Colombelli; Rainer Pepperkok; Ernst H K Stelzer; Emmanuel G Reynaud
Journal:  Med Sci (Paris)       Date:  2006 Jun-Jul       Impact factor: 0.818

5.  Resolution enhancement in a light-sheet-based microscope (SPIM).

Authors:  Christoph J Engelbrecht; Ernst H Stelzer
Journal:  Opt Lett       Date:  2006-05-15       Impact factor: 3.776

Review 6.  Nanoscale resolution in GFP-based microscopy.

Authors:  Katrin I Willig; Robert R Kellner; Rebecca Medda; Birka Hein; Stefan Jakobs; Stefan W Hell
Journal:  Nat Methods       Date:  2006-09       Impact factor: 28.547

7.  Three-dimensional preparation and imaging reveal intrinsic microtubule properties.

Authors:  Philipp J Keller; Francesco Pampaloni; Ernst H K Stelzer
Journal:  Nat Methods       Date:  2007-09-09       Impact factor: 28.547

8.  Thin laser light sheet microscope for microbial oceanography.

Authors:  Eran Fuchs; Jules Jaffe; Richard Long; Farooq Azam
Journal:  Opt Express       Date:  2002-01-28       Impact factor: 3.894

9.  Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain.

Authors:  Hans-Ulrich Dodt; Ulrich Leischner; Anja Schierloh; Nina Jährling; Christoph Peter Mauch; Katrin Deininger; Jan Michael Deussing; Matthias Eder; Walter Zieglgänsberger; Klaus Becker
Journal:  Nat Methods       Date:  2007-03-25       Impact factor: 28.547

10.  Optical projection tomography as a tool for 3D microscopy and gene expression studies.

Authors:  James Sharpe; Ulf Ahlgren; Paul Perry; Bill Hill; Allyson Ross; Jacob Hecksher-Sørensen; Richard Baldock; Duncan Davidson
Journal:  Science       Date:  2002-04-19       Impact factor: 47.728

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  50 in total

1.  Propagation stability of self-reconstructing Bessel beams enables contrast-enhanced imaging in thick media.

Authors:  Florian O Fahrbach; Alexander Rohrbach
Journal:  Nat Commun       Date:  2012-01-17       Impact factor: 14.919

2.  New technologies for 21st century plant science.

Authors:  David W Ehrhardt; Wolf B Frommer
Journal:  Plant Cell       Date:  2012-02-24       Impact factor: 11.277

Review 3.  Optical sectioning microscopy with planar or structured illumination.

Authors:  Jerome Mertz
Journal:  Nat Methods       Date:  2011-09-29       Impact factor: 28.547

4.  Nuclear export, enlightened.

Authors:  Thoru Pederson
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-29       Impact factor: 11.205

5.  Imaging fluorescence (cross-) correlation spectroscopy in live cells and organisms.

Authors:  Jan W Krieger; Anand P Singh; Nirmalya Bag; Christoph S Garbe; Timothy E Saunders; Jörg Langowski; Thorsten Wohland
Journal:  Nat Protoc       Date:  2015-11-05       Impact factor: 13.491

6.  Macro-optical trapping for sample confinement in light sheet microscopy.

Authors:  Zhengyi Yang; Peeter Piksarv; David E K Ferrier; Frank J Gunn-Moore; Kishan Dholakia
Journal:  Biomed Opt Express       Date:  2015-07-08       Impact factor: 3.732

7.  Advancing multiscale structural mapping of the brain through fluorescence imaging and analysis across length scales.

Authors:  L J Hogstrom; S M Guo; K Murugadoss; M Bathe
Journal:  Interface Focus       Date:  2016-02-06       Impact factor: 3.906

8.  A 3-D cell culture system to study epithelia functions using microcarriers.

Authors:  Petra H Jakob; Jessica Kehrer; Peter Flood; Catharina Wiegel; Uta Haselmann; Markus Meissner; Ernst H K Stelzer; Emmanuel G Reynaud
Journal:  Cytotechnology       Date:  2016-02-04       Impact factor: 2.058

9.  Nuclear export of single native mRNA molecules observed by light sheet fluorescence microscopy.

Authors:  Jan Peter Siebrasse; Tim Kaminski; Ulrich Kubitscheck
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-21       Impact factor: 11.205

10.  A single molecule view on Dbp5 and mRNA at the nuclear pore.

Authors:  Tim Kaminski; Jan Peter Siebrasse; Ulrich Kubitscheck
Journal:  Nucleus       Date:  2013-01-01       Impact factor: 4.197

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