Literature DB >> 19404416

Chemical genetics: reshaping biology through chemistry.

Stefan Florian1, Stefan Hümmer, Mario Catarinella, Thomas U Mayer.   

Abstract

To understand biological processes, biologists typically study how perturbations of protein functions affect the phenotype. Protein activity in living cells can be influenced in many different ways: by manipulation of the genomic information, by injecting inhibitory antibodies, or, more recently, by the use of ribonucleic acid-medicated interference (RNAi). All these methods have proven to be extremely helpful, as they possess a high degree of specificity. However, they are less suitable for experiments requiring precise timing and fast reversibility of the perturbation. The advantage of small molecules is that they specifically interact with their target on a fast time scale and often in a reversible manner. In the last 15 years, this approach, termed "chemical genetics," has received a lot of attention. The term genetics pays tribute to the analogy between chemical genetics and the classic genetic approach, where manipulations at the gene level are used to draw conclusions about the function of the corresponding protein. Chemical genetics has only recently been used as a systematic approach in biology. The term was coined in the 1990's, when combinatorial chemistry was developed as a fast method to synthesize large compound libraries [Mitchison (1994) "Towards a pharmacological genetics," Chem. Biol. 1, 3-6; Schreiber (1998) "Chemical genetics resulting from a passion for synthetic organic chemistry," Bioorg. Med. Chem. 6, 1127-1152].

Year:  2007        PMID: 19404416      PMCID: PMC2639840          DOI: 10.2976/1.2752600

Source DB:  PubMed          Journal:  HFSP J        ISSN: 1955-205X


  70 in total

Review 1.  The target of rapamycin (TOR) proteins.

Authors:  B Raught; A C Gingras; N Sonenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-19       Impact factor: 11.205

Review 2.  The renaissance of GSK3.

Authors:  P Cohen; S Frame
Journal:  Nat Rev Mol Cell Biol       Date:  2001-10       Impact factor: 94.444

Review 3.  Quality, not quantity: the role of natural products and chemical proteomics in modern drug discovery.

Authors:  Andrew M Piggott; Peter Karuso
Journal:  Comb Chem High Throughput Screen       Date:  2004-11       Impact factor: 1.339

Review 4.  The interplay between structure-based design and combinatorial chemistry.

Authors:  Chamila N Rupasinghe; Mark R Spaller
Journal:  Curr Opin Chem Biol       Date:  2006-04-17       Impact factor: 8.822

5.  Biochemical suppression of small-molecule inhibitors: a strategy to identify inhibitor targets and signaling pathway components.

Authors:  Jeffrey R Peterson; Andres M Lebensohn; Henry E Pelish; Marc W Kirschner
Journal:  Chem Biol       Date:  2006-04

6.  High-throughput assay for small molecules that modulate zebrafish embryonic heart rate.

Authors:  C Geoffrey Burns; David J Milan; Eric J Grande; Wolfgang Rottbauer; Calum A MacRae; Mark C Fishman
Journal:  Nat Chem Biol       Date:  2005-09-18       Impact factor: 15.040

7.  Towards a pharmacological genetics.

Authors:  T J Mitchison
Journal:  Chem Biol       Date:  1994-09

8.  Targets for cell cycle arrest by the immunosuppressant rapamycin in yeast.

Authors:  J Heitman; N R Movva; M N Hall
Journal:  Science       Date:  1991-08-23       Impact factor: 47.728

9.  Target of rapamycin in yeast, TOR2, is an essential phosphatidylinositol kinase homolog required for G1 progression.

Authors:  J Kunz; R Henriquez; U Schneider; M Deuter-Reinhard; N R Movva; M N Hall
Journal:  Cell       Date:  1993-05-07       Impact factor: 41.582

10.  Genetic and molecular analysis of a Caenorhabditis elegans beta-tubulin that conveys benzimidazole sensitivity.

Authors:  M Driscoll; E Dean; E Reilly; E Bergholz; M Chalfie
Journal:  J Cell Biol       Date:  1989-12       Impact factor: 10.539

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  2 in total

1.  In-depth Proteome of the Hypopharyngeal Glands of Honeybee Workers Reveals Highly Activated Protein and Energy Metabolism in Priming the Secretion of Royal Jelly.

Authors:  Han Hu; Gebreamlak Bezabih; Mao Feng; Qiaohong Wei; Xufeng Zhang; Fan Wu; Lifeng Meng; Yu Fang; Bin Han; Chuan Ma; Jianke Li
Journal:  Mol Cell Proteomics       Date:  2019-01-07       Impact factor: 5.911

Review 2.  Human carboxylesterases and fluorescent probes to image their activity in live cells.

Authors:  Anchal Singh; Mingze Gao; Michael W Beck
Journal:  RSC Med Chem       Date:  2021-05-18
  2 in total

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