Literature DB >> 19396630

Systems biology and heart failure: concepts, methods, and potential research applications.

Kirkwood F Adams1.   

Abstract

Dramatic advances in molecular biology dominated twentieth century biomedical science and delineated the function of individual genes and molecules in exquisite detail. However, biological processes cannot be fully understood based on the properties of individual genes and molecules alone, since these elements act in concert to enable the specific functions that make for living cells and organisms. The discipline of systems biology provides a novel conceptual framework for understanding biological phenomenon. Systems biology synthesizes information concerning the interactions of genes and molecules and allows characterization of the supramolecular networks and functional modules that represent the most essential aspects of cell organization and physiology.

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Year:  2010        PMID: 19396630     DOI: 10.1007/s10741-009-9138-x

Source DB:  PubMed          Journal:  Heart Fail Rev        ISSN: 1382-4147            Impact factor:   4.214


  175 in total

Review 1.  Translation: in retrospect and prospect.

Authors:  C R Woese
Journal:  RNA       Date:  2001-08       Impact factor: 4.942

2.  An integrative genomics approach to infer causal associations between gene expression and disease.

Authors:  Eric E Schadt; John Lamb; Xia Yang; Jun Zhu; Steve Edwards; Debraj Guhathakurta; Solveig K Sieberts; Stephanie Monks; Marc Reitman; Chunsheng Zhang; Pek Yee Lum; Amy Leonardson; Rolf Thieringer; Joseph M Metzger; Liming Yang; John Castle; Haoyuan Zhu; Shera F Kash; Thomas A Drake; Alan Sachs; Aldons J Lusis
Journal:  Nat Genet       Date:  2005-06-19       Impact factor: 38.330

Review 3.  The model organism as a system: integrating 'omics' data sets.

Authors:  Andrew R Joyce; Bernhard Ø Palsson
Journal:  Nat Rev Mol Cell Biol       Date:  2006-03       Impact factor: 94.444

4.  Of arrows and flows. Causality, determination, and specificity in the Central Dogma of molecular biology.

Authors:  Bernardino Fantini
Journal:  Hist Philos Life Sci       Date:  2006       Impact factor: 1.205

Review 5.  Tilting at quixotic trait loci (QTL): an evolutionary perspective on genetic causation.

Authors:  Kenneth M Weiss
Journal:  Genetics       Date:  2008-08       Impact factor: 4.562

Review 6.  The TDT and other family-based tests for linkage disequilibrium and association.

Authors:  R S Spielman; W J Ewens
Journal:  Am J Hum Genet       Date:  1996-11       Impact factor: 11.025

7.  A discordant-sibship test for disequilibrium and linkage: no need for parental data.

Authors:  S Horvath; N M Laird
Journal:  Am J Hum Genet       Date:  1998-12       Impact factor: 11.025

8.  Genome-wide association analysis identifies loci for type 2 diabetes and triglyceride levels.

Authors:  Richa Saxena; Benjamin F Voight; Valeriya Lyssenko; Noël P Burtt; Paul I W de Bakker; Hong Chen; Jeffrey J Roix; Sekar Kathiresan; Joel N Hirschhorn; Mark J Daly; Thomas E Hughes; Leif Groop; David Altshuler; Peter Almgren; Jose C Florez; Joanne Meyer; Kristin Ardlie; Kristina Bengtsson Boström; Bo Isomaa; Guillaume Lettre; Ulf Lindblad; Helen N Lyon; Olle Melander; Christopher Newton-Cheh; Peter Nilsson; Marju Orho-Melander; Lennart Råstam; Elizabeth K Speliotes; Marja-Riitta Taskinen; Tiinamaija Tuomi; Candace Guiducci; Anna Berglund; Joyce Carlson; Lauren Gianniny; Rachel Hackett; Liselotte Hall; Johan Holmkvist; Esa Laurila; Marketa Sjögren; Maria Sterner; Aarti Surti; Margareta Svensson; Malin Svensson; Ryan Tewhey; Brendan Blumenstiel; Melissa Parkin; Matthew Defelice; Rachel Barry; Wendy Brodeur; Jody Camarata; Nancy Chia; Mary Fava; John Gibbons; Bob Handsaker; Claire Healy; Kieu Nguyen; Casey Gates; Carrie Sougnez; Diane Gage; Marcia Nizzari; Stacey B Gabriel; Gung-Wei Chirn; Qicheng Ma; Hemang Parikh; Delwood Richardson; Darrell Ricke; Shaun Purcell
Journal:  Science       Date:  2007-04-26       Impact factor: 47.728

Review 9.  Pharmacogenomics for neurohormonal intervention in heart failure.

Authors:  Dennis M McNamara
Journal:  Cardiol Clin       Date:  2008-02       Impact factor: 2.213

Review 10.  Application of genome-wide single nucleotide polymorphism typing: simple association and beyond.

Authors:  J Raphael Gibbs; Andrew Singleton
Journal:  PLoS Genet       Date:  2006-10-06       Impact factor: 5.917

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  5 in total

Review 1.  'Integrative Physiology 2.0': integration of systems biology into physiology and its application to cardiovascular homeostasis.

Authors:  Diederik W D Kuster; Daphne Merkus; Jolanda van der Velden; Adrie J M Verhoeven; Dirk J Duncker
Journal:  J Physiol       Date:  2011-01-04       Impact factor: 5.182

2.  Differential protein expression and basal lamina remodeling in human heart failure.

Authors:  Evelyn H Kim; Vladimir I Galchev; Jin Young Kim; Sean A Misek; Tamara K Stevenson; Matthew D Campbell; Francis D Pagani; Sharlene M Day; T Craig Johnson; Joseph G Washburn; Karen L Vikstrom; Daniel E Michele; David E Misek; Margaret V Westfall
Journal:  Proteomics Clin Appl       Date:  2016-01-25       Impact factor: 3.494

3.  Using systems biology approaches to understand cardiac inflammation and extracellular matrix remodeling in the setting of myocardial infarction.

Authors:  Omid Ghasemi; Yonggang Ma; Merry L Lindsey; Yu-Fang Jin
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2014 Jan-Feb

Review 4.  Systems biology and biomechanical model of heart failure.

Authors:  George E Louridas; Katerina G Lourida
Journal:  Curr Cardiol Rev       Date:  2012-08

5.  Adiponectin may contribute to synovitis and joint destruction in rheumatoid arthritis by stimulating vascular endothelial growth factor, matrix metalloproteinase-1, and matrix metalloproteinase-13 expression in fibroblast-like synoviocytes more than proinflammatory mediators.

Authors:  Hyun-Mi Choi; Yeon-Ah Lee; Sang-Hoon Lee; Seung-Jae Hong; Dae-Hyun Hahm; Sang-Yun Choi; Hyung-In Yang; Myung Chul Yoo; Kyoung Soo Kim
Journal:  Arthritis Res Ther       Date:  2009-11-02       Impact factor: 5.156

  5 in total

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