Literature DB >> 19390830

Temporal and spatial expression patterns of nine Arabidopsis genes encoding Jumonji C-domain proteins.

Eun-Hye Hong1, Young-Min Jeong, Jee-Youn Ryu, Richard M Amasino, Bosl Noh, Yoo-Sun Noh.   

Abstract

Diverse posttranslational modifications of histones, such as acetylation and methylation, play important roles in controlling gene expression. Histone methylation in particular is involved in a broad range of biological processes, including heterochromatin formation, X-chromosome inactivation, genomic imprinting, and transcriptional regulation. Recently, it has been demonstrated that proteins containing the Jumonji (Jmj) C domain can demethylate histones. In Arabidopsis, twenty-one genes encode JmjC domain-containing proteins, which can be clustered into five clades. To address the biological roles of the Arabidopsis genes encoding JmjC-domain proteins, we analyzed the temporal and spatial expression patterns of nine genes. RT-PCR analyses indicate all nine Arabidopsis thaliana Jmj (AtJmj) genes studied are actively expressed in various tissues. Furthermore, studies of transgenic plants harboring AtJmj::beta-glucuronidase fusion constructs reveal that these nine AtJmj genes are expressed in a developmentally and spatially regulated manner.

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Year:  2009        PMID: 19390830     DOI: 10.1007/s10059-009-0054-7

Source DB:  PubMed          Journal:  Mol Cells        ISSN: 1016-8478            Impact factor:   5.034


  11 in total

1.  Wide-scale screening of T-DNA lines for transcription factor genes affecting male gametophyte development in Arabidopsis.

Authors:  David Reňák; Nikoleta Dupl'áková; David Honys
Journal:  Sex Plant Reprod       Date:  2011-11-20

Review 2.  Dynamics of H3K27me3 methylation and demethylation in plant development.

Authors:  Eng-Seng Gan; Yifeng Xu; Toshiro Ito
Journal:  Plant Signal Behav       Date:  2015

Review 3.  Chromatin remodeling and the circadian clock: Jumonji C-domain containing proteins.

Authors:  Sheen X Lu; Elaine M Tobin
Journal:  Plant Signal Behav       Date:  2011-06-01

4.  A JUMONJI Protein with E3 Ligase and Histone H3 Binding Activities Affects Transposon Silencing in Arabidopsis.

Authors:  Tina Kabelitz; Krzysztof Brzezinka; Thomas Friedrich; Michał Górka; Alexander Graf; Christian Kappel; Isabel Bäurle
Journal:  Plant Physiol       Date:  2016-03-15       Impact factor: 8.340

5.  The Jumonji C domain-containing protein JMJ30 regulates period length in the Arabidopsis circadian clock.

Authors:  Sheen X Lu; Stephen M Knowles; Candace J Webb; R Brandon Celaya; Chuah Cha; Jonathan P Siu; Elaine M Tobin
Journal:  Plant Physiol       Date:  2010-12-07       Impact factor: 8.340

6.  Involvement of a Jumonji-C domain-containing histone demethylase in DRM2-mediated maintenance of DNA methylation.

Authors:  Angelique Deleris; Maxim V C Greenberg; Israel Ausin; Rona W Y Law; Guillaume Moissiard; Daniel Schubert; Steven E Jacobsen
Journal:  EMBO Rep       Date:  2010-11-05       Impact factor: 8.807

7.  IBM1, a JmjC domain-containing histone demethylase, is involved in the regulation of RNA-directed DNA methylation through the epigenetic control of RDR2 and DCL3 expression in Arabidopsis.

Authors:  Di Fan; Yan Dai; Xuncheng Wang; Zhenjie Wang; Hang He; Hongchun Yang; Ying Cao; Xing Wang Deng; Ligeng Ma
Journal:  Nucleic Acids Res       Date:  2012-07-05       Impact factor: 16.971

8.  Genome-wide evaluation of histone methylation changes associated with leaf senescence in Arabidopsis.

Authors:  Judy A Brusslan; Ana M Rus Alvarez-Canterbury; Nishanth Ulhas Nair; Judd C Rice; Michael J Hitchler; Matteo Pellegrini
Journal:  PLoS One       Date:  2012-03-12       Impact factor: 3.240

9.  A companion cell-dominant and developmentally regulated H3K4 demethylase controls flowering time in Arabidopsis via the repression of FLC expression.

Authors:  Hongchun Yang; Zhifu Han; Ying Cao; Di Fan; Hong Li; Huixian Mo; Yi Feng; Lei Liu; Zheng Wang; Yanling Yue; Sujuan Cui; She Chen; Jijie Chai; Ligeng Ma
Journal:  PLoS Genet       Date:  2012-04-19       Impact factor: 5.917

10.  Repression of FLOWERING LOCUS T chromatin by functionally redundant histone H3 lysine 4 demethylases in Arabidopsis.

Authors:  Ju-Hee Jeong; Hae-Ryong Song; Jong-Hyun Ko; Young-Min Jeong; Young Eun Kwon; Jae Hong Seol; Richard M Amasino; Bosl Noh; Yoo-Sun Noh
Journal:  PLoS One       Date:  2009-11-25       Impact factor: 3.240

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