Literature DB >> 19388079

Auxiliary Ca2+ binding sites can influence the structure of CIB1.

Aaron P Yamniuk1, Kathryn L Anderson, Marie E Fraser, Hans J Vogel.   

Abstract

Recent X-ray crystal structures and solution NMR spectroscopy data for calcium- and integrin-binding protein 1 (CIB1) have all revealed a common EF-hand domain structure for the protein. However, the orientation of the two protein domains, the oligomerization state, and the conformations of the N- and C-terminal extensions differ among the structures. In this study, we examine whether the binding of glutathione or auxiliary Ca(2+) ions as observed in the crystal structures, occur in solution, and whether these interactions can influence the structure or dimerization of CIB1. In addition, we test the potential phosphatase activity of CIB1, which was hypothesized based on the glutathione binding site geometry observed in one of the crystal structures of the protein. Biophysical and biochemical experiments failed to detect glutathione binding, protein dimerization, or phosphatase activity for CIB1 under several solution conditions. However, our data identify low affinity (K(d), 10(-2)M) Ca(2+) binding events that influence the structures of the N- and C-terminal extensions of CIB1 under high (300 mM) Ca(2+) crystallization conditions. In addition to providing a rationale for differences amongst the various solution and crystal structures of CIB1, our results show that the impact of low affinity Ca(2+) binding events should be considered when analyzing and interpreting protein crystallographic structures determined in the presence of very high Ca(2+) concentrations.

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Year:  2009        PMID: 19388079      PMCID: PMC2771315          DOI: 10.1002/pro.104

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  16 in total

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4.  Identification of a novel calcium-binding protein that interacts with the integrin alphaIIb cytoplasmic domain.

Authors:  U P Naik; P M Patel; L V Parise
Journal:  J Biol Chem       Date:  1997-02-21       Impact factor: 5.157

5.  NMR View: A computer program for the visualization and analysis of NMR data.

Authors:  B A Johnson; R A Blevins
Journal:  J Biomol NMR       Date:  1994-09       Impact factor: 2.835

6.  The interaction between calcium- and integrin-binding protein 1 and the alphaIIb integrin cytoplasmic domain involves a novel C-terminal displacement mechanism.

Authors:  Aaron P Yamniuk; Hiroaki Ishida; Hans J Vogel
Journal:  J Biol Chem       Date:  2006-07-06       Impact factor: 5.157

7.  The solution structure of HIV-1 Nef reveals an unexpected fold and permits delineation of the binding surface for the SH3 domain of Hck tyrosine protein kinase.

Authors:  S Grzesiek; A Bax; G M Clore; A M Gronenborn; J S Hu; J Kaufman; I Palmer; S J Stahl; P T Wingfield
Journal:  Nat Struct Biol       Date:  1996-04

8.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

9.  Structural and biochemical characterization of CIB1 delineates a new family of EF-hand-containing proteins.

Authors:  Holly R Gentry; Alex U Singer; Laurie Betts; Cheng Yang; Joseph D Ferrara; John Sondek; Leslie V Parise
Journal:  J Biol Chem       Date:  2004-12-01       Impact factor: 5.157

10.  Domain stability and metal-induced folding of calcium- and integrin-binding protein 1.

Authors:  Aaron P Yamniuk; Dylan M Silver; Kathryn L Anderson; Stephen R Martin; Hans J Vogel
Journal:  Biochemistry       Date:  2007-05-22       Impact factor: 3.162

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  4 in total

1.  Identification of novel integrin binding partners for calcium and integrin binding protein 1 (CIB1): structural and thermodynamic basis of CIB1 promiscuity.

Authors:  Thomas C Freeman; Justin L Black; Holly G Bray; Onur Dagliyan; Yi I Wu; Ashutosh Tripathy; Nikolay V Dokholyan; Tina M Leisner; Leslie V Parise
Journal:  Biochemistry       Date:  2013-09-25       Impact factor: 3.162

2.  Solution structures of Ca2+-CIB1 and Mg2+-CIB1 and their interactions with the platelet integrin alphaIIb cytoplasmic domain.

Authors:  Hao Huang; Hiroaki Ishida; Aaron P Yamniuk; Hans J Vogel
Journal:  J Biol Chem       Date:  2011-03-09       Impact factor: 5.157

3.  Translocation of sphingosine kinase 1 to the plasma membrane is mediated by calcium- and integrin-binding protein 1.

Authors:  Kate E Jarman; Paul A B Moretti; Julia R Zebol; Stuart M Pitson
Journal:  J Biol Chem       Date:  2009-10-23       Impact factor: 5.157

Review 4.  CIB1: a small protein with big ambitions.

Authors:  Tina M Leisner; Thomas C Freeman; Justin L Black; Leslie V Parise
Journal:  FASEB J       Date:  2016-04-26       Impact factor: 5.191

  4 in total

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