Literature DB >> 17516631

Domain stability and metal-induced folding of calcium- and integrin-binding protein 1.

Aaron P Yamniuk1, Dylan M Silver, Kathryn L Anderson, Stephen R Martin, Hans J Vogel.   

Abstract

It is widely accepted that a pair of EF-hands is the functional unit of typical four EF-hand proteins such as calmodulin or troponin C. In this work we investigate the structure and stability of the four EF-hand domains in the related protein calcium- and integrin-binding protein 1 (CIB1) in the presence and absence of Mg2+ or Ca2+, to determine if similar EF-hand interactions occur. The backbone structure and flexibility of CIB1 were first studied by NMR spectroscopy, and these studies were complimented with steady-state fluorescence spectroscopy and chemical denaturation experiments using mutant CIB1 proteins having single Trp reporter groups in each of the four EF-hand domains EF-I (F34W), EF-II (F91W), EF-III (L128W), and EF-IV (F173W). We find that Mg2+-CIB1 adopts a well-folded structure similar to Ca2+-CIB1, except for some conformational heterogeneity in the C-terminal EF-IV domain. The structure of apo-CIB1 is significantly more dynamic, especially within EF-II, EF-III, and a partially unfolded EF-IV region, but the N-terminal EF-I region of apo-CIB1 has a well-ordered and more stable structure. The data reveal significant communication between the N- and C-lobes of CIB1, and show that transient intermediate conformations are formed along the unfolding pathway for each form of the protein. Collectively the data demonstrate that the communication between the paired EF-hand domains as well as between the N- and C-lobes of CIB1 is distinct from the ancestral proteins calmodulin and troponin C, which might be important for the unique function of CIB1 in numerous biological processes.

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Year:  2007        PMID: 17516631     DOI: 10.1021/bi700200z

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

1.  Calcium-dependent conformational flexibility of a CUB domain controls activation of the complement serine protease C1r.

Authors:  Balázs Major; József Kardos; Katalin Adrienna Kékesi; Zsolt Lorincz; Péter Závodszky; Péter Gál
Journal:  J Biol Chem       Date:  2010-02-23       Impact factor: 5.157

2.  Divalent Cations and the Divergence of βγ-Crystallin Function.

Authors:  Kyle W Roskamp; Natalia Kozlyuk; Suvrajit Sengupta; Jan C Bierma; Rachel W Martin
Journal:  Biochemistry       Date:  2019-11-01       Impact factor: 3.162

3.  Metal ion binding to anticoagulation factor II from the venom of Agkistrodon acutus: stabilization of the structure and regulation of the binding affinity to activated coagulation factor X.

Authors:  Dengke Shen; Xiaolong Xu; Hao Wu; Lili Peng; Yan Zhang; Jiajia Song; Qingde Su
Journal:  J Biol Inorg Chem       Date:  2011-01-01       Impact factor: 3.358

4.  Solution structures of Ca2+-CIB1 and Mg2+-CIB1 and their interactions with the platelet integrin alphaIIb cytoplasmic domain.

Authors:  Hao Huang; Hiroaki Ishida; Aaron P Yamniuk; Hans J Vogel
Journal:  J Biol Chem       Date:  2011-03-09       Impact factor: 5.157

5.  Effect of metal ion substitutions in anticoagulation factor I from the venom of Agkistrodon acutus on the binding of activated coagulation factor X and on structural stability.

Authors:  Xiaolong Xu; Liyun Zhang; Dengke Shen; Hao Wu; Lili Peng; Jiehua Li
Journal:  J Biol Inorg Chem       Date:  2009-01-31       Impact factor: 3.358

6.  Auxiliary Ca2+ binding sites can influence the structure of CIB1.

Authors:  Aaron P Yamniuk; Kathryn L Anderson; Marie E Fraser; Hans J Vogel
Journal:  Protein Sci       Date:  2009-05       Impact factor: 6.725

Review 7.  CIB1: a small protein with big ambitions.

Authors:  Tina M Leisner; Thomas C Freeman; Justin L Black; Leslie V Parise
Journal:  FASEB J       Date:  2016-04-26       Impact factor: 5.191

8.  Single-molecule Force Spectroscopy Reveals the Calcium Dependence of the Alternative Conformations in the Native State of a βγ-Crystallin Protein.

Authors:  Zackary N Scholl; Qing Li; Weitao Yang; Piotr E Marszalek
Journal:  J Biol Chem       Date:  2016-07-04       Impact factor: 5.157

9.  Preferential Binding of Mg2+ Over Ca2+ to CIB2 Triggers an Allosteric Switch Impaired in Usher Syndrome Type 1J.

Authors:  Rosario Vallone; Giuditta Dal Cortivo; Mariapina D'Onofrio; Daniele Dell'Orco
Journal:  Front Mol Neurosci       Date:  2018-08-17       Impact factor: 5.639

Review 10.  Calcium- and Integrin-Binding Protein 2 (CIB2) in Physiology and Disease: Bright and Dark Sides.

Authors:  Giuditta Dal Cortivo; Daniele Dell'Orco
Journal:  Int J Mol Sci       Date:  2022-03-24       Impact factor: 5.923

  10 in total

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