Literature DB >> 17945183

The cytochromes P450 and b5 and their reductases--promising targets for structural studies by advanced solid-state NMR spectroscopy.

Ulrich H N Dürr1, Lucy Waskell, Ayyalusamy Ramamoorthy.   

Abstract

Members of the cytochrome P450 (cyt P450) superfamily of enzymes oxidize a wide array of endogenous and xenobiotic substances to prepare them for excretion. Most of the drugs in use today are metabolized in part by a small set of human cyt P450 isozymes. Consequently, cyt P450s have for a long time received a lot of attention in biochemical and pharmacological research. Cytochrome P450 receives electrons from cytochrome P450 reductase and in selected cases from cytochrome b5 (cyt b5). Numerous structural studies of cyt P450s, cyt b5, and their reductases have given considerable insight into fundamental structure-function relationships. However, structural studies so far have had to rely on truncated variants of the enzymes to make conventional X-ray crystallographic and solution-state NMR techniques applicable. In spite of significant efforts it has not yet been possible to crystallize any of these proteins in their full-length membrane bound forms. The truncated parts of the enzymes are assumed to be alpha-helical membrane anchors that are essential for some key properties of cyt P450s. In the present contribution we set out with a basic overview on the current status of functional and structural studies. Our main aim is to demonstrate how advanced modern solid-state NMR spectroscopic techniques will be able to make substantial progress in cyt P450 research. Solid-state NMR spectroscopy has sufficiently matured over the last decade to be fully applicable to any membrane protein system. Recent years have seen a remarkable increase in studies on membrane protein structure using a host of solid-state NMR techniques. Solid-state NMR is the only technique available today for structural studies on full-length cyt P450 and full-length cyt b5. We aim to give a detailed account of modern techniques as applicable to cyt P450 and cyt b5, to show what has already been possible and what seems to be viable in the very near future.

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Year:  2007        PMID: 17945183     DOI: 10.1016/j.bbamem.2007.08.007

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  50 in total

1.  Fast NMR data acquisition from bicelles containing a membrane-associated peptide at natural-abundance.

Authors:  Kazutoshi Yamamoto; Subramanian Vivekanandan; Ayyalusamy Ramamoorthy
Journal:  J Phys Chem B       Date:  2011-10-11       Impact factor: 2.991

2.  Cytochrome b5 reductase encoded by CBR1 is essential for a functional male gametophyte in Arabidopsis.

Authors:  Laura L Wayne; James G Wallis; Rajesh Kumar; Jonathan E Markham; John Browse
Journal:  Plant Cell       Date:  2013-08-30       Impact factor: 11.277

3.  Proton-evolved local-field solid-state NMR studies of cytochrome b5 embedded in bicelles, revealing both structural and dynamical information.

Authors:  Ronald Soong; Pieter E S Smith; Jiadi Xu; Kazutoshi Yamamoto; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  J Am Chem Soc       Date:  2010-04-28       Impact factor: 15.419

4.  Tilt and azimuthal angles of a transmembrane peptide: a comparison between molecular dynamics calculations and solid-state NMR data of sarcolipin in lipid membranes.

Authors:  Lei Shi; Alessandro Cembran; Jiali Gao; Gianluigi Veglia
Journal:  Biophys J       Date:  2009-05-06       Impact factor: 4.033

5.  Proton-detected 2D radio frequency driven recoupling solid-state NMR studies on micelle-associated cytochrome-b(5).

Authors:  Manoj Kumar Pandey; Subramanian Vivekanandan; Kazutoshi Yamamoto; Sangchoul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  J Magn Reson       Date:  2014-03-01       Impact factor: 2.229

6.  Probing the transmembrane structure and dynamics of microsomal NADPH-cytochrome P450 oxidoreductase by solid-state NMR.

Authors:  Rui Huang; Kazutoshi Yamamoto; Meng Zhang; Nataliya Popovych; Ivan Hung; Sang-Choul Im; Zhehong Gan; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  Biophys J       Date:  2014-05-20       Impact factor: 4.033

7.  Bicelle-enabled structural studies on a membrane-associated cytochrome B5 by solid-state MAS NMR spectroscopy.

Authors:  Jiadi Xu; Ulrich H N Dürr; Sang-Choul Im; Zhehong Gan; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

8.  Magic-angle spinning solid-state NMR spectroscopy of nanodisc-embedded human CYP3A4.

Authors:  Aleksandra Z Kijac; Ying Li; Stephen G Sligar; Chad M Rienstra
Journal:  Biochemistry       Date:  2007-11-07       Impact factor: 3.162

9.  Cytochrome b₅ coexpression increases Tetrahymena thermophila Δ6 fatty acid desaturase activity in Saccharomyces cerevisiae.

Authors:  Jeremy L Dahmen; Rebecca Olsen; Deirdre Fahy; James G Wallis; John Browse
Journal:  Eukaryot Cell       Date:  2013-04-12

10.  Freezing point depression of water in phospholipid membranes: a solid-state NMR study.

Authors:  Dong-Kuk Lee; Byung Soo Kwon; Ayyalusamy Ramamoorthy
Journal:  Langmuir       Date:  2008-12-02       Impact factor: 3.882

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