Literature DB >> 19373497

Theoretical investigations on the hydrolysis pathway of tin verdoheme complexes: elucidation of tin's ring opening inhibition role.

Mahdi D Davari1, Homayoon Bahrami, Mansour Zahedi, Nasser Safari.   

Abstract

In order to obtain a better molecular understanding of inhibitory role of tin metal in the verdoheme ring opening process, hydrolysis of three possibly six, five, and four coordinate verdoheme complexes of tin(IV) and (II) have been studied using DFT method. The results of calculations indicate that, in excellent accord with experimental reports, hydrolysis of different possibly coordinated tin(IV) and (II) verdohemes does not lead to the opening of the macrocycle. Contrary to iron and zinc verdohemes, in five and four coordinate verdoheme complexes of tin(IV) and (II), formation of open ring helical complexes of tin are unfavorable both thermodynamically and kinetically. In these pathways, coordination of hydroxide nucleophile to tin metal due to the highly charged, exclusive oxophilicity nature of the Sn center, and high affinity of Sn to increase coordination state are proposed responsible as inhibiting roles of tin via the ring opening. While, in saturated six coordinate tin(IV) and (II) verdoheme complexes the ring opening of tin verdohemes is possible thermodynamically, but it is not predicted to occur from a kinetics point of view. In the six coordinate pathway, tin plays no coordination role and direct addition of hydroxide nucleophile to the positive oxo-carbon centers and formation of closed ring hydroxy compounds is proposed for preventing the verdoheme ring opening. These key points and findings have been corroborated by the results obtained from atomic charge analysis, geometrical parameters, and molecular orbital calculations. In addition, the results of inhibiting ring opening reaction of tin verdoheme complexes could support the great interest of tin porphyrin analogues as pharmacologic means of chemoprevention of neonatal jaundice by the competitive inhibitory action of tin porphyrins on heme oxygenase.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19373497     DOI: 10.1007/s00894-009-0495-0

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  43 in total

1.  How heme metabolism occurs in heme oxygenase: computational study of oxygen-donation ability of the oxo and hydroperoxo species.

Authors:  Takashi Kamachi; Alexander F Shestakov; Kazunari Yoshizawa
Journal:  J Am Chem Soc       Date:  2004-03-31       Impact factor: 15.419

2.  Compound I of heme oxygenase cannot hydroxylate its heme meso-carbon.

Authors:  Toshitaka Matsui; Sun Hee Kim; Hiromichi Jin; Brian M Hoffman; Masao Ikeda-Saito
Journal:  J Am Chem Soc       Date:  2006-02-01       Impact factor: 15.419

Review 3.  Heme oxygenase, steering dioxygen activation toward heme hydroxylation.

Authors:  Mario Rivera; Yuhong Zeng
Journal:  J Inorg Biochem       Date:  2005-01       Impact factor: 4.155

4.  Reaction intermediates and single turnover rate constants for the oxidation of heme by human heme oxygenase-1.

Authors:  Y Liu; P R Ortiz de Montellano
Journal:  J Biol Chem       Date:  2000-02-25       Impact factor: 5.157

5.  Coupled oxidation vs heme oxygenation: insights from axial ligand mutants of mitochondrial cytochrome b5.

Authors:  Ludivina Avila; Hong-wei Huang; Christopher O Damaso; Shen Lu; Pierre Moënne-Loccoz; Mario Rivera
Journal:  J Am Chem Soc       Date:  2003-04-09       Impact factor: 15.419

6.  Water-assisted oxo mechanism for heme metabolism.

Authors:  Takashi Kamachi; Kazunari Yoshizawa
Journal:  J Am Chem Soc       Date:  2005-08-03       Impact factor: 15.419

7.  Theoretical investigations of the hydrolysis pathway of verdoheme to biliverdin.

Authors:  Mahin Gheidi; Nasser Safari; Homayoon Bahrami; Mansour Zahedi
Journal:  J Inorg Biochem       Date:  2006-11-17       Impact factor: 4.155

8.  Congenital nonobstructive, nonhemolytic jaundice: effect of tin-mesoporphyrin.

Authors:  F F Rubaltelli; C Dario; L Zancan
Journal:  Pediatrics       Date:  1995-06       Impact factor: 7.124

9.  Control of severe hyperbilirubinemia in full-term newborns with the inhibitor of bilirubin production Sn-mesoporphyrin.

Authors:  J C Martinez; H O Garcia; L E Otheguy; G S Drummond; A Kappas
Journal:  Pediatrics       Date:  1999-01       Impact factor: 7.124

10.  Metallobiliverdin radicals--DFT studies.

Authors:  Ludmiła Szterenberg; Lechosław Latos-Grazyński; Jacek Wojaczyński
Journal:  Chemphyschem       Date:  2003-07-14       Impact factor: 3.102

View more
  1 in total

1.  Ionic bond in hydrogen transferring of the ferrous and/or ferric human/mouse verdoheme oxygenase.

Authors:  Hamideh Tasharofi; Maryam Daghighi Asli; Parisa Rajabali Jamaat
Journal:  J Mol Model       Date:  2021-05-20       Impact factor: 1.810

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.