Literature DB >> 12901300

Metallobiliverdin radicals--DFT studies.

Ludmiła Szterenberg1, Lechosław Latos-Grazyński, Jacek Wojaczyński.   

Abstract

Several aspects of the molecular and electronic structure of biliverdin derivatives have been studied using density functional theory (DFT). The calculations have been performed for complexes of trianion (BvO2)3- and dianion [BvO(OH)]2-, derived from two tautomeric forms of biliverdin, BvO2H3 and [BvO(OH)]H2, with redox innocent metal ions: lithium(I), zinc(II), and gallium(III). One-electron-oxidized and reduced forms of each complex (cation and anion radicals) have been also considered. The molecular structures of all species investigated are characterized by a helical arrangement of tetrapyrrolic ligands with the metal ion lying in the plane formed by the two central pyrrole rings. The spin density distribution in four types of metallobiliverdin radicals--[(BvO2.)Mn+]n-2,[[BvO(OH).]Mn+]n-1 (cation radicals),[(BvO2.)Mn+]n-4,[[BvO(OH).]Mn+]n-3 (anion radicals)--has been investigated. In general, the absolute values of spin density on meso carbon atoms were larger than for the beta-carbon atoms. Sign alteration of spin density has been found for meso positions, and also for the beta-carbon atoms of at least two pyrrole rings. The calculated spin density maps accounted for the essential NMR spectroscopic features of iron biliverdin derivatives, including the considerable isotropic shifts detected for the meso resonances and shift alteration at the meso and beta-positions.

Entities:  

Year:  2003        PMID: 12901300     DOI: 10.1002/cphc.200200611

Source DB:  PubMed          Journal:  Chemphyschem        ISSN: 1439-4235            Impact factor:   3.102


  3 in total

1.  Theoretical investigation of the ring opening process of verdoheme to biliverdin in the presence of dioxygen.

Authors:  Mahin Gheidi; Nasser Safari; Mansour Zahedi
Journal:  J Mol Model       Date:  2010-02-16       Impact factor: 1.810

2.  Noninnocent effect of axial ligand on the heme degradation process: a theoretical approach to hydrolysis pathway of verdoheme to biliverdin.

Authors:  Parisa R Jamaat; Nasser Safari; Mina Ghiasi; S Shahab-al-din Naghavi; Mansour Zahedi
Journal:  J Biol Inorg Chem       Date:  2007-10-23       Impact factor: 3.358

3.  Theoretical investigations on the hydrolysis pathway of tin verdoheme complexes: elucidation of tin's ring opening inhibition role.

Authors:  Mahdi D Davari; Homayoon Bahrami; Mansour Zahedi; Nasser Safari
Journal:  J Mol Model       Date:  2009-04-17       Impact factor: 1.810

  3 in total

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