Literature DB >> 19369199

Single molecule mechanics of the kinesin neck.

Thomas Bornschlögl1, Günther Woehlke, Matthias Rief.   

Abstract

Structural integrity as well as mechanical stability of the parts of a molecular motor are crucial for its function. In this study, we used high-resolution force spectroscopy by atomic force microscopy to investigate the force-dependent opening kinetics of the neck coiled coil of Kinesin-1 from Drosophila melanogaster. We find that even though the overall thermodynamic stability of the neck is low, the average opening force of the coiled coil is >11 pN when stretched with pulling velocities >150 nm/s. These high unzipping forces ensure structural integrity during motor motion. The high mechanical stability is achieved through a very narrow N-terminal unfolding barrier if compared with a conventional leucine zipper. The experimentally mapped mechanical unzipping profile allows direct assignment of distinct mechanical stabilities to the different coiled-coil subunits. The coiled-coil sequence seems to be tuned in an optimal way to ensure both mechanical stability as well as motor regulation through charged residues.

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Year:  2009        PMID: 19369199      PMCID: PMC2678465          DOI: 10.1073/pnas.0812620106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  A structural change in the kinesin motor protein that drives motility.

Authors:  S Rice; A W Lin; D Safer; C L Hart; N Naber; B O Carragher; S M Cain; E Pechatnikova; E M Wilson-Kubalek; M Whittaker; E Pate; R Cooke; E W Taylor; R A Milligan; R D Vale
Journal:  Nature       Date:  1999-12-16       Impact factor: 49.962

2.  Effects of side-chain characteristics on stability and oligomerization state of a de novo-designed model coiled-coil: 20 amino acid substitutions in position "d".

Authors:  B Tripet; K Wagschal; P Lavigne; C T Mant; R S Hodges
Journal:  J Mol Biol       Date:  2000-07-07       Impact factor: 5.469

3.  Formation of the compact confomer of kinesin requires a COOH-terminal heavy chain domain and inhibits microtubule-stimulated ATPase activity.

Authors:  M F Stock; J Guerrero; B Cobb; C T Eggers; T G Huang; X Li; D D Hackney
Journal:  J Biol Chem       Date:  1999-05-21       Impact factor: 5.157

4.  Single molecule unzipping of coiled coils: sequence resolved stability profiles.

Authors:  Thomas Bornschlögl; Matthias Rief
Journal:  Phys Rev Lett       Date:  2006-03-20       Impact factor: 9.161

5.  Feedback of the kinesin-1 neck-linker position on the catalytic site.

Authors:  Katrin Hahlen; Bettina Ebbing; Jörg Reinders; Judith Mergler; Albert Sickmann; Guenther Woehlke
Journal:  J Biol Chem       Date:  2006-05-08       Impact factor: 5.157

6.  Internal strain regulates the nucleotide binding site of the kinesin leading head.

Authors:  Changbong Hyeon; José N Onuchic
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-07       Impact factor: 11.205

7.  How kinesin waits between steps.

Authors:  Teppei Mori; Ronald D Vale; Michio Tomishige
Journal:  Nature       Date:  2007-11-14       Impact factor: 49.962

8.  The coiled-coil helix in the neck of kinesin.

Authors:  M Thormählen; A Marx; S Sack; E Mandelkow
Journal:  J Struct Biol       Date:  1998       Impact factor: 2.867

9.  Demonstration of coiled-coil interactions within the kinesin neck region using synthetic peptides. Implications for motor activity.

Authors:  B Tripet; R D Vale; R S Hodges
Journal:  J Biol Chem       Date:  1997-04-04       Impact factor: 5.157

10.  Mechanical unfoldons as building blocks of maltose-binding protein.

Authors:  Morten Bertz; Matthias Rief
Journal:  J Mol Biol       Date:  2008-02-21       Impact factor: 5.469

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  17 in total

Review 1.  Sampling protein form and function with the atomic force microscope.

Authors:  Marian Baclayon; Wouter H Roos; Gijs J L Wuite
Journal:  Mol Cell Proteomics       Date:  2010-06-18       Impact factor: 5.911

2.  Fast or Slow, Either Head Can Start the Processive Run of Kinesin-2 KIF3AC.

Authors:  Pengwei Zhang; Ivan Rayment; Susan P Gilbert
Journal:  J Biol Chem       Date:  2015-12-28       Impact factor: 5.157

3.  Folding and assembly of the large molecular machine Hsp90 studied in single-molecule experiments.

Authors:  Markus Jahn; Johannes Buchner; Thorsten Hugel; Matthias Rief
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-19       Impact factor: 11.205

Review 4.  Moving into the cell: single-molecule studies of molecular motors in complex environments.

Authors:  Claudia Veigel; Christoph F Schmidt
Journal:  Nat Rev Mol Cell Biol       Date:  2011-02-16       Impact factor: 94.444

5.  Full distance-resolved folding energy landscape of one single protein molecule.

Authors:  J Christof M Gebhardt; Thomas Bornschlögl; Matthias Rief
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-19       Impact factor: 11.205

6.  Hierarchical cascades of instability govern the mechanics of coiled coils: helix unfolding precedes coil unzipping.

Authors:  Elham Hamed; Sinan Keten
Journal:  Biophys J       Date:  2014-07-15       Impact factor: 4.033

7.  Family-specific Kinesin Structures Reveal Neck-linker Length Based on Initiation of the Coiled-coil.

Authors:  Rebecca K Phillips; Logan G Peter; Susan P Gilbert; Ivan Rayment
Journal:  J Biol Chem       Date:  2016-07-26       Impact factor: 5.157

8.  Highly anisotropic stability and folding kinetics of a single coiled coil protein under mechanical tension.

Authors:  Ying Gao; George Sirinakis; Yongli Zhang
Journal:  J Am Chem Soc       Date:  2011-07-22       Impact factor: 15.419

9.  Fast and forceful refolding of stretched alpha-helical solenoid proteins.

Authors:  Minkyu Kim; Khadar Abdi; Gwangrog Lee; Mahir Rabbi; Whasil Lee; Ming Yang; Christopher J Schofield; Vann Bennett; Piotr E Marszalek
Journal:  Biophys J       Date:  2010-06-16       Impact factor: 4.033

Review 10.  A Review of Single-Cell Adhesion Force Kinetics and Applications.

Authors:  Ashwini Shinde; Kavitha Illath; Pallavi Gupta; Pallavi Shinde; Ki-Taek Lim; Moeto Nagai; Tuhin Subhra Santra
Journal:  Cells       Date:  2021-03-05       Impact factor: 6.600

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