Literature DB >> 16605876

Single molecule unzipping of coiled coils: sequence resolved stability profiles.

Thomas Bornschlögl1, Matthias Rief.   

Abstract

We use a high resolution atomic force microscopy technique to mechanically unzip and rezip single coiled-coil proteins. This allows us to read off the complete stability profile of the protein turn by turn. We investigated three coiled coils with different length as well as a point mutation and find force fluctuations between 9 and 15 pN that can be directly related to the amino-acid sequences. An equilibrium model previously applied to DNA fully describes the mechanical unzipping process including free-energy contributions of the individual turns and seed formation energy.

Year:  2006        PMID: 16605876     DOI: 10.1103/PhysRevLett.96.118102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  18 in total

1.  Mechanical unfolding of an ankyrin repeat protein.

Authors:  David Serquera; Whasil Lee; Giovanni Settanni; Piotr E Marszalek; Emanuele Paci; Laura S Itzhaki
Journal:  Biophys J       Date:  2010-04-07       Impact factor: 4.033

2.  Mechanical Folding and Unfolding of Protein Barnase at the Single-Molecule Level.

Authors:  Anna Alemany; Blanca Rey-Serra; Silvia Frutos; Ciro Cecconi; Felix Ritort
Journal:  Biophys J       Date:  2016-01-05       Impact factor: 4.033

3.  Direct observation of active protein folding using lock-in force spectroscopy.

Authors:  Michael Schlierf; Felix Berkemeier; Matthias Rief
Journal:  Biophys J       Date:  2007-08-17       Impact factor: 4.033

4.  Improving single molecule force spectroscopy through automated real-time data collection and quantification of experimental conditions.

Authors:  Zackary N Scholl; Piotr E Marszalek
Journal:  Ultramicroscopy       Date:  2013-08-07       Impact factor: 2.689

5.  Force-driven separation of short double-stranded DNA.

Authors:  Dominik Ho; Julia L Zimmermann; Florian A Dehmelt; Uta Steinbach; Matthias Erdmann; Philip Severin; Katja Falter; Hermann E Gaub
Journal:  Biophys J       Date:  2009-12-16       Impact factor: 4.033

6.  Full distance-resolved folding energy landscape of one single protein molecule.

Authors:  J Christof M Gebhardt; Thomas Bornschlögl; Matthias Rief
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-19       Impact factor: 11.205

7.  From mechanical folding trajectories to intrinsic energy landscapes of biopolymers.

Authors:  Michael Hinczewski; J Christof M Gebhardt; Matthias Rief; D Thirumalai
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-04       Impact factor: 11.205

8.  Sequence-resolved free energy profiles of stress-bearing vimentin intermediate filaments.

Authors:  Beatrice Ramm; Johannes Stigler; Michael Hinczewski; D Thirumalai; Harald Herrmann; Günther Woehlke; Matthias Rief
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-21       Impact factor: 11.205

9.  Stick-slip kinetics in a bistable bar immersed in a heat bath.

Authors:  Chuanpeng Sun; Prashant K Purohit
Journal:  Int J Solids Struct       Date:  2019-07-31       Impact factor: 3.900

10.  Single reconstituted neuronal SNARE complexes zipper in three distinct stages.

Authors:  Ying Gao; Sylvain Zorman; Gregory Gundersen; Zhiqun Xi; Lu Ma; George Sirinakis; James E Rothman; Yongli Zhang
Journal:  Science       Date:  2012-08-16       Impact factor: 47.728

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