Literature DB >> 19362816

Regulatory aspects of genetic research with residual human tissue: effective and efficient data coding.

Marjanka K Schmidt1, Eric Vermeulen, Rob A E M Tollenaar, Laura J Van't Veer, Flora E van Leeuwen.   

Abstract

In a large retrospective cohort of breast cancer patients, BRCA1 and BRCA2 germline mutations were analysed in DNA isolated from residual paraffin-embedded tissue samples. Because it was not feasible to ask individual for informed consent, a data and DNA coding protocol, based on the Dutch 'Code of Conduct', was developed. The corner stone of the protocol is that a trusted third party, in our case a notary, keeps the coding keys of clinical data and DNA. Because (re)linkage of the combined coded clinical and genotyping data (BRCA1/2) is only possible through the notary's keys, these can be considered to be comparable to anonymised data at the level of the researcher. Issues around retrospective genotyping of allegedly high-risk mutations and the coding procedure itself are discussed. Our protocol is an appropriate solution to safeguard the privacy of patients when using residual tissue or DNA of patients. Importantly, the coding procedure also allows re-linkage of new genotyping data or extended patient follow-up data to the valuable coded dataset.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19362816     DOI: 10.1016/j.ejca.2009.03.008

Source DB:  PubMed          Journal:  Eur J Cancer        ISSN: 0959-8049            Impact factor:   9.162


  4 in total

Review 1.  The Bio-PIN: a concept to improve biobanking.

Authors:  J J Nietfeld; Jeremy Sugarman; Jan-Eric Litton
Journal:  Nat Rev Cancer       Date:  2011-03-17       Impact factor: 60.716

2.  Annexin A1 regulates TGF-beta signaling and promotes metastasis formation of basal-like breast cancer cells.

Authors:  Marjo de Graauw; Martine H van Miltenburg; Marjanka K Schmidt; Chantal Pont; Reshma Lalai; Joelle Kartopawiro; Evangelia Pardali; Sylvia E Le Dévédec; Vincent T Smit; Annemieke van der Wal; Laura J Van't Veer; Anne-Marie Cleton-Jansen; Peter ten Dijke; Bob van de Water
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-22       Impact factor: 11.205

3.  Evaluation of the Dutch BRCA1/2 clinical genetic center referral criteria in an unselected early breast cancer population.

Authors:  Alexandra J van den Broek; Karen de Ruiter; Laura J van 't Veer; Rob A E M Tollenaar; Flora E van Leeuwen; Senno Verhoef; Marjanka K Schmidt
Journal:  Eur J Hum Genet       Date:  2014-08-20       Impact factor: 4.246

4.  A novel metadata management model to capture consent for record linkage in longitudinal research studies.

Authors:  Christiana McMahon; Spiros Denaxas
Journal:  Inform Health Soc Care       Date:  2017-11-06       Impact factor: 2.439

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.