Literature DB >> 19359578

Multiscale modeling of form and function.

Adam J Engler1, Patrick O Humbert, Bernhard Wehrle-Haller, Valerie M Weaver.   

Abstract

Topobiology posits that morphogenesis is driven by differential adhesive interactions among heterogeneous cell populations. This paradigm has been revised to include force-dependent molecular switches, cell and tissue tension, and reciprocal interactions with the microenvironment. It is now appreciated that tissue development is executed through conserved decision-making modules that operate on multiple length scales from the molecular and subcellular level through to the cell and tissue level and that these regulatory mechanisms specify cell and tissue fate by modifying the context of cellular signaling and gene expression. Here, we discuss the origin of these decision-making modules and illustrate how emergent properties of adhesion-directed multicellular structures sculpt the tissue, promote its functionality, and maintain its homeostasis through spatial segregation and organization of anchored proteins and secreted factors and through emergent properties of tissues, including tension fields and energy optimization.

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Year:  2009        PMID: 19359578      PMCID: PMC4527531          DOI: 10.1126/science.1170107

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  77 in total

1.  Imaging coexisting fluid domains in biomembrane models coupling curvature and line tension.

Authors:  Tobias Baumgart; Samuel T Hess; Watt W Webb
Journal:  Nature       Date:  2003-10-23       Impact factor: 49.962

2.  Evolution of key cell signaling and adhesion protein families predates animal origins.

Authors:  Nicole King; Christopher T Hittinger; Sean B Carroll
Journal:  Science       Date:  2003-07-18       Impact factor: 47.728

Review 3.  The unicellular ancestry of animal development.

Authors:  Nicole King
Journal:  Dev Cell       Date:  2004-09       Impact factor: 12.270

Review 4.  Comparison of molecular mechanisms mediating cell contact phenomena in model developmental systems: an exploration of universality.

Authors:  Vivienne M Bowers-Morrow; Sinan O Ali; Keith L Williams
Journal:  Biol Rev Camb Philos Soc       Date:  2004-08

5.  Mechanically activated integrin switch controls alpha5beta1 function.

Authors:  Julie C Friedland; Mark H Lee; David Boettiger
Journal:  Science       Date:  2009-01-30       Impact factor: 47.728

6.  On the origin of Metazoan adhesion receptors: cloning of integrin alpha subunit from the sponge Geodia cydonium.

Authors:  Z Pancer; M Kruse; I Müller; W E Müller
Journal:  Mol Biol Evol       Date:  1997-04       Impact factor: 16.240

7.  The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans.

Authors:  Nicole King; M Jody Westbrook; Susan L Young; Alan Kuo; Monika Abedin; Jarrod Chapman; Stephen Fairclough; Uffe Hellsten; Yoh Isogai; Ivica Letunic; Michael Marr; David Pincus; Nicholas Putnam; Antonis Rokas; Kevin J Wright; Richard Zuzow; William Dirks; Matthew Good; David Goodstein; Derek Lemons; Wanqing Li; Jessica B Lyons; Andrea Morris; Scott Nichols; Daniel J Richter; Asaf Salamov; J G I Sequencing; Peer Bork; Wendell A Lim; Gerard Manning; W Todd Miller; William McGinnis; Harris Shapiro; Robert Tjian; Igor V Grigoriev; Daniel Rokhsar
Journal:  Nature       Date:  2008-02-14       Impact factor: 49.962

8.  The Trichoplax genome and the nature of placozoans.

Authors:  Mansi Srivastava; Emina Begovic; Jarrod Chapman; Nicholas H Putnam; Uffe Hellsten; Takeshi Kawashima; Alan Kuo; Therese Mitros; Asaf Salamov; Meredith L Carpenter; Ana Y Signorovitch; Maria A Moreno; Kai Kamm; Jane Grimwood; Jeremy Schmutz; Harris Shapiro; Igor V Grigoriev; Leo W Buss; Bernd Schierwater; Stephen L Dellaporta; Daniel S Rokhsar
Journal:  Nature       Date:  2008-08-21       Impact factor: 49.962

9.  Stretching single talin rod molecules activates vinculin binding.

Authors:  Armando del Rio; Raul Perez-Jimenez; Ruchuan Liu; Pere Roca-Cusachs; Julio M Fernandez; Michael P Sheetz
Journal:  Science       Date:  2009-01-30       Impact factor: 63.714

10.  Unexpected diversity of cnidarian integrins: expression during coral gastrulation.

Authors:  Brent A Knack; Akira Iguchi; Chuya Shinzato; David C Hayward; Eldon E Ball; David J Miller
Journal:  BMC Evol Biol       Date:  2008-05-09       Impact factor: 3.260

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  56 in total

Review 1.  Mechanical stretching for tissue engineering: two-dimensional and three-dimensional constructs.

Authors:  Brandon D Riehl; Jae-Hong Park; Il Keun Kwon; Jung Yul Lim
Journal:  Tissue Eng Part B Rev       Date:  2012-03-28       Impact factor: 6.389

2.  Cell sheet integrity and nanomechanical breakdown during programmed cell death.

Authors:  Jiashan Wang; Andrew E Pelling
Journal:  Med Biol Eng Comput       Date:  2010-06-10       Impact factor: 2.602

3.  Spatially patterned matrix elasticity directs stem cell fate.

Authors:  Chun Yang; Frank W DelRio; Hao Ma; Anouk R Killaars; Lena P Basta; Kyle A Kyburz; Kristi S Anseth
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-19       Impact factor: 11.205

Review 4.  Nanoscale surface modifications of medically relevant metals: state-of-the art and perspectives.

Authors:  Fabio Variola; John B Brunski; Giovanna Orsini; Paulo Tambasco de Oliveira; Rima Wazen; Antonio Nanci
Journal:  Nanoscale       Date:  2010-10-26       Impact factor: 7.790

5.  Biophysical regulation of epigenetic state and cell reprogramming.

Authors:  Timothy L Downing; Jennifer Soto; Constant Morez; Timothee Houssin; Ashley Fritz; Falei Yuan; Julia Chu; Shyam Patel; David V Schaffer; Song Li
Journal:  Nat Mater       Date:  2013-10-20       Impact factor: 43.841

Review 6.  Extracellular matrix as an inductive scaffold for functional tissue reconstruction.

Authors:  Bryan N Brown; Stephen F Badylak
Journal:  Transl Res       Date:  2013-11-08       Impact factor: 7.012

7.  Contractility dominates adhesive ligand density in regulating cellular de-adhesion and retraction kinetics.

Authors:  Shamik Sen; Win Pin Ng; Sanjay Kumar
Journal:  Ann Biomed Eng       Date:  2010-10-29       Impact factor: 3.934

8.  Interface biology of implants.

Authors:  Joachim Rychly; Barbara Nebe
Journal:  Cell Adh Migr       Date:  2009-10-16       Impact factor: 3.405

Review 9.  Directed assembly of cell-laden hydrogels for engineering functional tissues.

Authors:  Nezamoddin N Kachouie; Yanan Du; Hojae Bae; Masoud Khabiry; Amirhossein F Ahari; Behnam Zamanian; Junji Fukuda; Ali Khademhosseini
Journal:  Organogenesis       Date:  2010 Oct-Dec       Impact factor: 2.500

10.  Surface Acoustic Waves Grant Superior Spatial Control of Cells Embedded in Hydrogel Fibers.

Authors:  James P Lata; Feng Guo; Jinshan Guo; Po-Hsun Huang; Jian Yang; Tony Jun Huang
Journal:  Adv Mater       Date:  2016-08-29       Impact factor: 30.849

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