Literature DB >> 24141451

Biophysical regulation of epigenetic state and cell reprogramming.

Timothy L Downing1, Jennifer Soto, Constant Morez, Timothee Houssin, Ashley Fritz, Falei Yuan, Julia Chu, Shyam Patel, David V Schaffer, Song Li.   

Abstract

Biochemical factors can help reprogram somatic cells into pluripotent stem cells, yet the role of biophysical factors during reprogramming is unknown. Here, we show that biophysical cues, in the form of parallel microgrooves on the surface of cell-adhesive substrates, can replace the effects of small-molecule epigenetic modifiers and significantly improve reprogramming efficiency. The mechanism relies on the mechanomodulation of the cells' epigenetic state. Specifically, decreased histone deacetylase activity and upregulation of the expression of WD repeat domain 5 (WDR5)--a subunit of H3 methyltranferase--by microgrooved surfaces lead to increased histone H3 acetylation and methylation. We also show that microtopography promotes a mesenchymal-to-epithelial transition in adult fibroblasts. Nanofibrous scaffolds with aligned fibre orientation produce effects similar to those produced by microgrooves, suggesting that changes in cell morphology may be responsible for modulation of the epigenetic state. These findings have important implications in cell biology and in the optimization of biomaterials for cell-engineering applications.

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Year:  2013        PMID: 24141451     DOI: 10.1038/nmat3777

Source DB:  PubMed          Journal:  Nat Mater        ISSN: 1476-1122            Impact factor:   43.841


  51 in total

1.  Dynamic force-induced direct dissociation of protein complexes in a nuclear body in living cells.

Authors:  Yeh-Chuin Poh; Sergey P Shevtsov; Farhan Chowdhury; Douglas C Wu; Sungsoo Na; Miroslav Dundr; Ning Wang
Journal:  Nat Commun       Date:  2012-05-29       Impact factor: 14.919

Review 2.  Molecules that promote or enhance reprogramming of somatic cells to induced pluripotent stem cells.

Authors:  Bo Feng; Jia-Hui Ng; Jian-Chien Dominic Heng; Huck-Hui Ng
Journal:  Cell Stem Cell       Date:  2009-04-03       Impact factor: 24.633

3.  E-cadherin is crucial for embryonic stem cell pluripotency and can replace OCT4 during somatic cell reprogramming.

Authors:  Torben Redmer; Sebastian Diecke; Tamara Grigoryan; Angel Quiroga-Negreira; Walter Birchmeier; Daniel Besser
Journal:  EMBO Rep       Date:  2011-07-01       Impact factor: 8.807

4.  Highly efficient miRNA-mediated reprogramming of mouse and human somatic cells to pluripotency.

Authors:  Frederick Anokye-Danso; Chinmay M Trivedi; Denise Juhr; Mudit Gupta; Zheng Cui; Ying Tian; Yuzhen Zhang; Wenli Yang; Peter J Gruber; Jonathan A Epstein; Edward E Morrisey
Journal:  Cell Stem Cell       Date:  2011-04-08       Impact factor: 24.633

5.  Wdr5 mediates self-renewal and reprogramming via the embryonic stem cell core transcriptional network.

Authors:  Yen-Sin Ang; Su-Yi Tsai; Dung-Fang Lee; Jonathan Monk; Jie Su; Kajan Ratnakumar; Junjun Ding; Yongchao Ge; Henia Darr; Betty Chang; Jianlong Wang; Michael Rendl; Emily Bernstein; Christoph Schaniel; Ihor R Lemischka
Journal:  Cell       Date:  2011-04-07       Impact factor: 41.582

6.  Reprogramming of human somatic cells to pluripotency with defined factors.

Authors:  In-Hyun Park; Rui Zhao; Jason A West; Akiko Yabuuchi; Hongguang Huo; Tan A Ince; Paul H Lerou; M William Lensch; George Q Daley
Journal:  Nature       Date:  2007-12-23       Impact factor: 49.962

Review 7.  Mechanisms and models of somatic cell reprogramming.

Authors:  Yosef Buganim; Dina A Faddah; Rudolf Jaenisch
Journal:  Nat Rev Genet       Date:  2013-06       Impact factor: 53.242

8.  In vitro reprogramming of fibroblasts into a pluripotent ES-cell-like state.

Authors:  Marius Wernig; Alexander Meissner; Ruth Foreman; Tobias Brambrink; Manching Ku; Konrad Hochedlinger; Bradley E Bernstein; Rudolf Jaenisch
Journal:  Nature       Date:  2007-06-06       Impact factor: 49.962

9.  In vivo reprogramming of adult pancreatic exocrine cells to beta-cells.

Authors:  Qiao Zhou; Juliana Brown; Andrew Kanarek; Jayaraj Rajagopal; Douglas A Melton
Journal:  Nature       Date:  2008-08-27       Impact factor: 49.962

10.  Induction of pluripotent stem cells by defined factors is greatly improved by small-molecule compounds.

Authors:  Danwei Huangfu; René Maehr; Wenjun Guo; Astrid Eijkelenboom; Melinda Snitow; Alice E Chen; Douglas A Melton
Journal:  Nat Biotechnol       Date:  2008-06-22       Impact factor: 54.908

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  135 in total

1.  Defined three-dimensional microenvironments boost induction of pluripotency.

Authors:  Massimiliano Caiazzo; Yuya Okawa; Adrian Ranga; Alessandra Piersigilli; Yoji Tabata; Matthias P Lutolf
Journal:  Nat Mater       Date:  2016-01-11       Impact factor: 43.841

2.  Topographical effects on fiber-mediated microRNA delivery to control oligodendroglial precursor cells development.

Authors:  Hua Jia Diao; Wei Ching Low; Q Richard Lu; Sing Yian Chew
Journal:  Biomaterials       Date:  2015-08-18       Impact factor: 12.479

Review 3.  Manufacturing Cell Therapies Using Engineered Biomaterials.

Authors:  Amr A Abdeen; Krishanu Saha
Journal:  Trends Biotechnol       Date:  2017-07-12       Impact factor: 19.536

4.  Cell reprogramming: Into the groove.

Authors:  Yan Xu; Longqi Liu; Andrew L Laslett; Miguel A Esteban
Journal:  Nat Mater       Date:  2013-12       Impact factor: 43.841

5.  Application of induced pluripotent stem cells to model smooth muscle cell function in vascular diseases.

Authors:  HaYeun Ji; Hye Sung Kim; Hae-Won Kim; Kam W Leong
Journal:  Curr Opin Biomed Eng       Date:  2017-03-22

6.  Ice-Templated Protein Nanoridges Induce Bone Tissue Formation.

Authors:  Mingying Yang; Yajun Shuai; Kegan S Sunderland; Chuanbin Mao
Journal:  Adv Funct Mater       Date:  2017-10-05       Impact factor: 18.808

7.  Nanotechnology-Based Approaches for Guiding Neural Regeneration.

Authors:  Shreyas Shah; Aniruddh Solanki; Ki-Bum Lee
Journal:  Acc Chem Res       Date:  2015-12-14       Impact factor: 22.384

Review 8.  Systems biology approach to developing S(2)RM-based "systems therapeutics" and naturally induced pluripotent stem cells.

Authors:  Greg Maguire; Peter Friedman
Journal:  World J Stem Cells       Date:  2015-05-26       Impact factor: 5.326

Review 9.  Application of biomaterials to advance induced pluripotent stem cell research and therapy.

Authors:  Zhixiang Tong; Aniruddh Solanki; Allison Hamilos; Oren Levy; Kendall Wen; Xiaolei Yin; Jeffrey M Karp
Journal:  EMBO J       Date:  2015-03-12       Impact factor: 11.598

Review 10.  "Looping In" Mechanics: Mechanobiologic Regulation of the Nucleus and the Epigenome.

Authors:  Eric N Dai; Su-Jin Heo; Robert L Mauck
Journal:  Adv Healthc Mater       Date:  2020-04-14       Impact factor: 9.933

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