Literature DB >> 19356593

Characterization of the in vitro HIV-1 capsid assembly pathway.

Eric Barklis1, Ayna Alfadhli, Carolyn McQuaw, Suraj Yalamuri, Amelia Still, Robin Lid Barklis, Ben Kukull, Claudia S López.   

Abstract

During the morphogenesis of mature human immunodeficiency virus-1 cores, viral capsid proteins assemble conical or tubular shells around viral ribonucleoprotein complexes. This assembly step is mimicked in vitro through reactions in which capsid proteins oligomerize to form long tubes, and this process can be modeled as consisting of a slow nucleation period, followed by a rapid phase of tube growth. We have developed a novel fluorescence microscopy approach to monitor in vitro assembly reactions and have employed it, along with electron microscopy analysis, to characterize the assembly process. Our results indicate that temperature, salt concentration, and pH changes have differential effects on tube nucleation and growth steps. We also demonstrate that assembly can be unidirectional or bidirectional, that growth can be capped, and that proteins can assemble onto the surfaces of tubes, yielding multiwalled or nested structures. Finally, experiments show that a peptide inhibitor of in vitro assembly also can dismantle preexisting tubes, suggesting that such reagents may possess antiviral effects against both viral assembly and uncoating. Our investigations help establish a basis for understanding the mechanism of mature human immunodeficiency virus-1 core assembly and avenues for antiviral inhibition.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19356593      PMCID: PMC2667805          DOI: 10.1016/j.jmb.2009.01.058

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  51 in total

1.  Structural polymorphism of the major capsid protein of rotavirus.

Authors:  J Lepault; I Petitpas; I Erk; J Navaza; D Bigot; M Dona; P Vachette; J Cohen; F A Rey
Journal:  EMBO J       Date:  2001-04-02       Impact factor: 11.598

2.  Image reconstructions of helical assemblies of the HIV-1 CA protein.

Authors:  S Li; C P Hill; W I Sundquist; J T Finch
Journal:  Nature       Date:  2000-09-21       Impact factor: 49.962

3.  Structural organization of authentic, mature HIV-1 virions and cores.

Authors:  John A G Briggs; Thomas Wilk; Reinhold Welker; Hans-Georg Kräusslich; Stephen D Fuller
Journal:  EMBO J       Date:  2003-04-01       Impact factor: 11.598

4.  Retrovirus capsid protein assembly arrangements.

Authors:  Keith Mayo; Doug Huseby; Jason McDermott; Brian Arvidson; Liam Finlay; Eric Barklis
Journal:  J Mol Biol       Date:  2003-01-03       Impact factor: 5.469

5.  Kinetic analysis of the role of intersubunit interactions in human immunodeficiency virus type 1 capsid protein assembly in vitro.

Authors:  Jason Lanman; Jennifer Sexton; Michael Sakalian; Peter E Prevelige
Journal:  J Virol       Date:  2002-07       Impact factor: 5.103

6.  Identification of novel interactions in HIV-1 capsid protein assembly by high-resolution mass spectrometry.

Authors:  Jason Lanman; TuKiet T Lam; Stephen Barnes; Michael Sakalian; Mark R Emmett; Alan G Marshall; Peter E Prevelige
Journal:  J Mol Biol       Date:  2003-01-24       Impact factor: 5.469

7.  Functional surfaces of the human immunodeficiency virus type 1 capsid protein.

Authors:  Uta K von Schwedler; Kirsten M Stray; Jennifer E Garrus; Wesley I Sundquist
Journal:  J Virol       Date:  2003-05       Impact factor: 5.103

8.  Antiviral inhibition of the HIV-1 capsid protein.

Authors:  Chun Tang; Erin Loeliger; Isaac Kinde; Samson Kyere; Keith Mayo; Eric Barklis; Yongnian Sun; Mingjun Huang; Michael F Summers
Journal:  J Mol Biol       Date:  2003-04-11       Impact factor: 5.469

9.  Model-based analysis of assembly kinetics for virus capsids or other spherical polymers.

Authors:  Dan Endres; Adam Zlotnick
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

10.  Assembly properties of the human immunodeficiency virus type 1 CA protein.

Authors:  Barbie K Ganser-Pornillos; Uta K von Schwedler; Kirsten M Stray; Christopher Aiken; Wesley I Sundquist
Journal:  J Virol       Date:  2004-03       Impact factor: 5.103

View more
  31 in total

Review 1.  Novel approaches to inhibiting HIV-1 replication.

Authors:  Catherine S Adamson; Eric O Freed
Journal:  Antiviral Res       Date:  2009-09-24       Impact factor: 5.970

2.  Effects of macromolecular crowding on the inhibition of virus assembly and virus-cell receptor recognition.

Authors:  Verónica Rincón; Rebeca Bocanegra; Alicia Rodríguez-Huete; Germán Rivas; Mauricio G Mateu
Journal:  Biophys J       Date:  2011-02-02       Impact factor: 4.033

Review 3.  HIV type 1 Gag as a target for antiviral therapy.

Authors:  Abdul A Waheed; Eric O Freed
Journal:  AIDS Res Hum Retroviruses       Date:  2011-09-21       Impact factor: 2.205

4.  Arc Oligomerization Is Regulated by CaMKII Phosphorylation of the GAG Domain: An Essential Mechanism for Plasticity and Memory Formation.

Authors:  Wenchi Zhang; Yang-An Chuang; Youn Na; Zengyou Ye; Liuqing Yang; Raozhou Lin; Jiechao Zhou; Jing Wu; Jessica Qiu; Alena Savonenko; Daniel J Leahy; Richard Huganir; David J Linden; Paul F Worley
Journal:  Mol Cell       Date:  2019-05-28       Impact factor: 17.970

5.  Determinants of the HIV-1 core assembly pathway.

Authors:  Claudia S López; Jacob D Eccles; Amelia Still; Rachel E Sloan; Robin Lid Barklis; Seyram M Tsagli; Eric Barklis
Journal:  Virology       Date:  2011-06-14       Impact factor: 3.616

6.  Higher-order structure of the Rous sarcoma virus SP assembly domain.

Authors:  Di L Bush; Eric B Monroe; Gregory J Bedwell; Peter E Prevelige; Judith M Phillips; Volker M Vogt
Journal:  J Virol       Date:  2014-03-05       Impact factor: 5.103

7.  Analysis of HIV-1 Matrix-Envelope Cytoplasmic Tail Interactions.

Authors:  Ayna Alfadhli; August O Staubus; Philip R Tedbury; Mariia Novikova; Eric O Freed; Eric Barklis
Journal:  J Virol       Date:  2019-10-15       Impact factor: 5.103

8.  Second site reversion of a mutation near the amino terminus of the HIV-1 capsid protein.

Authors:  Claudia S López; Seyram M Tsagli; Rachel Sloan; Jacob Eccles; Eric Barklis
Journal:  Virology       Date:  2013-09-21       Impact factor: 3.616

9.  Analysis of human immunodeficiency virus type 1 matrix binding to membranes and nucleic acids.

Authors:  Ayna Alfadhli; Amelia Still; Eric Barklis
Journal:  J Virol       Date:  2009-09-23       Impact factor: 5.103

Review 10.  HIV-1 Capsid Inhibitors as Antiretroviral Agents.

Authors:  Suzie Thenin-Houssier; Susana T Valente
Journal:  Curr HIV Res       Date:  2016       Impact factor: 1.581

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.