Literature DB >> 19352404

Ubiquitin-like protein activation by E1 enzymes: the apex for downstream signalling pathways.

Brenda A Schulman1, J Wade Harper.   

Abstract

Attachment of ubiquitin or ubiquitin-like proteins (known as UBLs) to their targets through multienzyme cascades is a central mechanism to modulate protein functions. This process is initiated by a family of mechanistically and structurally related E1 (or activating) enzymes. These activate UBLs through carboxy-terminal adenylation and thiol transfer, and coordinate the use of UBLs in specific downstream pathways by charging cognate E2 (or conjugating) enzymes, which then interact with the downstream ubiquitylation machinery to coordinate the modification of the target. A broad understanding of how E1 enzymes activate UBLs and how they selectively coordinate UBLs with downstream function has come from enzymatic, structural and genetic studies.

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Year:  2009        PMID: 19352404      PMCID: PMC2712597          DOI: 10.1038/nrm2673

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  120 in total

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Review 2.  Proteolysis: from the lysosome to ubiquitin and the proteasome.

Authors:  Aaron Ciechanover
Journal:  Nat Rev Mol Cell Biol       Date:  2005-01       Impact factor: 94.444

3.  Substrate properties of ubiquitin carboxyl-terminally derived peptide probes for protein ubiquitination.

Authors:  Michael M Madden; Wenjiao Song; Paul G Martell; Yong Ren; Jian Feng; Qing Lin
Journal:  Biochemistry       Date:  2008-02-29       Impact factor: 3.162

4.  The basis for selective E1-E2 interactions in the ISG15 conjugation system.

Authors:  Larissa A Durfee; Melissa L Kelley; Jon M Huibregtse
Journal:  J Biol Chem       Date:  2008-06-26       Impact factor: 5.157

5.  The C-terminal region of an Apg7p/Cvt2p is required for homodimerization and is essential for its E1 activity and E1-E2 complex formation.

Authors:  M Komatsu; I Tanida; T Ueno; M Ohsumi; Y Ohsumi; E Kominami
Journal:  J Biol Chem       Date:  2001-01-03       Impact factor: 5.157

6.  Functional heterogeneity of ubiquitin carrier proteins.

Authors:  C M Pickart; I A Rose
Journal:  J Biol Chem       Date:  1985-02-10       Impact factor: 5.157

7.  Conservation in the mechanism of Nedd8 activation by the human AppBp1-Uba3 heterodimer.

Authors:  Richard N Bohnsack; Arthur L Haas
Journal:  J Biol Chem       Date:  2003-05-10       Impact factor: 5.157

8.  Targeting SUMO E1 to ubiquitin ligases: a viral strategy to counteract sumoylation.

Authors:  Roberto Boggio; Alfonso Passafaro; Susanna Chiocca
Journal:  J Biol Chem       Date:  2007-03-28       Impact factor: 5.157

9.  E1-L2 activates both ubiquitin and FAT10.

Authors:  Yu-Hsin Chiu; Qinmiao Sun; Zhijian J Chen
Journal:  Mol Cell       Date:  2007-09-21       Impact factor: 17.970

10.  The sulfurtransferase activity of Uba4 presents a link between ubiquitin-like protein conjugation and activation of sulfur carrier proteins.

Authors:  Jennifer Schmitz; Mita Mullick Chowdhury; Petra Hänzelmann; Manfred Nimtz; Eun-Young Lee; Hermann Schindelin; Silke Leimkühler
Journal:  Biochemistry       Date:  2008-05-21       Impact factor: 3.162

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  340 in total

1.  A continuous kinetic assay for adenylation enzyme activity and inhibition.

Authors:  Daniel J Wilson; Courtney C Aldrich
Journal:  Anal Biochem       Date:  2010-05-05       Impact factor: 3.365

Review 2.  SCF ubiquitin ligase-targeted therapies.

Authors:  Jeffrey R Skaar; Julia K Pagan; Michele Pagano
Journal:  Nat Rev Drug Discov       Date:  2014-11-14       Impact factor: 84.694

3.  A pro-inflammatory role of deubiquitinating enzyme cylindromatosis (CYLD) in vascular smooth muscle cells.

Authors:  Shuai Liu; Jiaju Lv; Liping Han; Tomonaga Ichikawa; Wenjuan Wang; Siying Li; Xing Li Wang; Dongqi Tang; Taixing Cui
Journal:  Biochem Biophys Res Commun       Date:  2012-03-01       Impact factor: 3.575

Review 4.  Twists and turns in ubiquitin-like protein conjugation cascades.

Authors:  Brenda A Schulman
Journal:  Protein Sci       Date:  2011-11-09       Impact factor: 6.725

5.  Insights into noncanonical E1 enzyme activation from the structure of autophagic E1 Atg7 with Atg8.

Authors:  Seung Beom Hong; Byeong-Won Kim; Kyung-Eun Lee; Se Woong Kim; Hyesung Jeon; Joon Kim; Hyun Kyu Song
Journal:  Nat Struct Mol Biol       Date:  2011-11-06       Impact factor: 15.369

6.  E1-E2 interactions in ubiquitin and Nedd8 ligation pathways.

Authors:  Zeynep Tokgöz; Thomas J Siepmann; Frederick Streich; Brajesh Kumar; Jennifer M Klein; Arthur L Haas
Journal:  J Biol Chem       Date:  2011-11-08       Impact factor: 5.157

7.  Mechanistic studies of substrate-assisted inhibition of ubiquitin-activating enzyme by adenosine sulfamate analogues.

Authors:  Jesse J Chen; Christopher A Tsu; James M Gavin; Michael A Milhollen; Frank J Bruzzese; William D Mallender; Michael D Sintchak; Nancy J Bump; Xiaofeng Yang; Jingya Ma; Huay-Keng Loke; Qing Xu; Ping Li; Neil F Bence; James E Brownell; Lawrence R Dick
Journal:  J Biol Chem       Date:  2011-10-03       Impact factor: 5.157

8.  E3 ligases Arf-bp1 and Pam mediate lithium-stimulated degradation of the circadian heme receptor Rev-erb alpha.

Authors:  Lei Yin; Shree Joshi; Nan Wu; Xin Tong; Mitchell A Lazar
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-07       Impact factor: 11.205

Review 9.  The MID1 gene product in physiology and disease.

Authors:  Rossella Baldini; Martina Mascaro; Germana Meroni
Journal:  Gene       Date:  2020-04-10       Impact factor: 3.688

Review 10.  Structural and functional insights to ubiquitin-like protein conjugation.

Authors:  Frederick C Streich; Christopher D Lima
Journal:  Annu Rev Biophys       Date:  2014       Impact factor: 12.981

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