Literature DB >> 1932548

Structure of a fluid dioleoylphosphatidylcholine bilayer determined by joint refinement of x-ray and neutron diffraction data. I. Scaling of neutron data and the distributions of double bonds and water.

M C Wiener1, G I King, S H White.   

Abstract

We described in two previous papers a method for the joint refinement of the structure of fluid bilayers using neutron and x-ray diffraction data (Wiener, M. C., and S. H. White 1991a, b. Biophys. J. 59: 162-173 and 174-185). An essential part of the method is the appropriate scaling of the diffraction data. Here we describe the scaling of the neutron data and the determination of the transbilayer distribution of double bonds in liquid-crystalline (L alpha phase) phospholipid bilayers of 1,2-dioleoyl-sn-glycero-3-phosphocholine (DOPC). The distribution was determined by neutron diffraction of oriented multilayers (66% RH) of DOPC specifically deuterated at the 9- and 10-position of both acyl chains. The double-bond distribution is described accurately by a pair of Gaussian functions each located at a position Zcc = 7.88 +/- 0.09 A from the bilayer center with 1/e-halfwidths of Acc = 4.29 +/- 0.16 A. Previously, we determined the transbilayer distribution of bromine atoms in a specifically halogenated lipid, 1-oleoyl-2-9,10-dibromostearoyl-sn-glycero-3-phosphocholine (OBPC), and showed it to be an isomorphous replacement for DOPC (Wiener, M. C., and S. H. White, 1991c. Biochemistry. In press). A comparison of the double-bond and bromine profiles indicates that the positions of the centers of the deuterated double bond and the brominated methylene Gaussian distributions are equal within experimental error and that each label undergoes similar average thermal motions with respect to the bilayer normal. The observation that the average position of a label on both acyl chains (the deuterated double bonds) is similar to the average position of a label on the 2-chain alone (the brominated methylenes) indicates that the maximum separation along the bilayer normal between the double bonds of the acyl chains is 1 A or less. The fully-resolved transbilayer water distribution, previously determined at lower resolution (Jacobs, R. E., and S. H. White. 1989. Biochemistry. 28:3421-3437), was obtained from the analysis of neutron diffraction data of DOPC hydrated with a D20/H20 mixture. The water distribution is described accurately by a pair of Gaussian functions each located at a position Zw = 22.51 +/- 0.77 A from the bilayer center with 1/e-half widths of Aw = 4.63 +/- 0.48A. We present the relative absolute neutron and x-ray structure factors of DOPC at 66% RH that will be used to solve the complete structure of DOPC which will be presented in a later paper of this series.

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Year:  1991        PMID: 1932548      PMCID: PMC1260100          DOI: 10.1016/S0006-3495(91)82086-0

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

1.  Fluid bilayer structure determination by the combined use of x-ray and neutron diffraction. II. "Composition-space" refinement method.

Authors:  M C Wiener; S H White
Journal:  Biophys J       Date:  1991-01       Impact factor: 4.033

2.  Structure and polymorphism of the hydrocarbon chains of lipids: a study of lecithin-water phases.

Authors:  A Tardieu; V Luzzati; F C Reman
Journal:  J Mol Biol       Date:  1973-04-25       Impact factor: 5.469

3.  Neutron diffraction studies on selectively deuterated phospholipid bilayers.

Authors:  G Büldt; H U Gally; A Seelig; J Seelig; G Zaccai
Journal:  Nature       Date:  1978-01-12       Impact factor: 49.962

4.  The structure of lipid bilayers and the effects of general anaesthetics. An x-ray and neutron diffraction study.

Authors:  N P Franks; W R Lieb
Journal:  J Mol Biol       Date:  1979-10-09       Impact factor: 5.469

5.  Neutron diffraction studies on phosphatidylcholine model membranes. I. Head group conformation.

Authors:  G Büldt; H U Gally; J Seelig; G Zaccai
Journal:  J Mol Biol       Date:  1979-11-15       Impact factor: 5.469

6.  Neutron diffraction studies on phosphatidylcholine model membranes. II. Chain conformation and segmental disorder.

Authors:  G Zaccai; G Büldt; A Seelig; J Seelig
Journal:  J Mol Biol       Date:  1979-11-15       Impact factor: 5.469

Review 7.  Preferred conformation and molecular packing of phosphatidylethanolamine and phosphatidylcholine.

Authors:  H Hauser; I Pascher; R H Pearson; S Sundell
Journal:  Biochim Biophys Acta       Date:  1981-06-16

8.  A direct method for determination of membrane electron density profiles on an absolute scale.

Authors:  N P Franks; T Arunachalam; E Caspi
Journal:  Nature       Date:  1978-11-30       Impact factor: 49.962

9.  Lipid selectivity of the calcium and magnesium ion dependent adenosinetriphosphatase, studied with fluorescence quenching by a brominated phospholipid.

Authors:  J M East; A G Lee
Journal:  Biochemistry       Date:  1982-08-17       Impact factor: 3.162

10.  Determining bilayer hydrocarbon thickness from neutron diffraction measurements using strip-function models.

Authors:  G I King; S H White
Journal:  Biophys J       Date:  1986-05       Impact factor: 4.033

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  48 in total

1.  Molecular simulation of dioleoylphosphatidylcholine lipid bilayers at differing levels of hydration.

Authors:  R J Mashl; H L Scott; S Subramaniam; E Jakobsson
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

2.  Electrostatic interactions and binding orientation of HIV-1 matrix studied by neutron reflectivity.

Authors:  Hirsh Nanda; Siddhartha A K Datta; Frank Heinrich; Mathias Lösche; Alan Rein; Susan Krueger; Joseph E Curtis
Journal:  Biophys J       Date:  2010-10-20       Impact factor: 4.033

3.  Experimental validation of molecular dynamics simulations of lipid bilayers: a new approach.

Authors:  Ryan W Benz; Francisco Castro-Román; Douglas J Tobias; Stephen H White
Journal:  Biophys J       Date:  2004-11-08       Impact factor: 4.033

4.  The structure of polyunsaturated lipid bilayers important for rhodopsin function: a neutron diffraction study.

Authors:  Mihaela Mihailescu; Klaus Gawrisch
Journal:  Biophys J       Date:  2005-10-28       Impact factor: 4.033

5.  Protein folding in membranes: insights from neutron diffraction studies of a membrane beta-sheet oligomer.

Authors:  Xue Han; Kalina Hristova; William C Wimley
Journal:  Biophys J       Date:  2007-09-14       Impact factor: 4.033

Review 6.  Modeling kinetics of subcellular disposition of chemicals.

Authors:  Stefan Balaz
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

7.  A membrane-translocating peptide penetrates into bilayers without significant bilayer perturbations.

Authors:  Juan Cruz; Mihaela Mihailescu; Greg Wiedman; Katherine Herman; Peter C Searson; William C Wimley; Kalina Hristova
Journal:  Biophys J       Date:  2013-06-04       Impact factor: 4.033

8.  Cholesterol does not induce segregation of liquid-ordered domains in bilayers modeling the inner leaflet of the plasma membrane.

Authors:  T Y Wang; J R Silvius
Journal:  Biophys J       Date:  2001-11       Impact factor: 4.033

9.  Structure of a fluid dioleoylphosphatidylcholine bilayer determined by joint refinement of x-ray and neutron diffraction data. II. Distribution and packing of terminal methyl groups.

Authors:  M C Wiener; S H White
Journal:  Biophys J       Date:  1992-02       Impact factor: 4.033

10.  Structure of a fluid dioleoylphosphatidylcholine bilayer determined by joint refinement of x-ray and neutron diffraction data. III. Complete structure.

Authors:  M C Wiener; S H White
Journal:  Biophys J       Date:  1992-02       Impact factor: 4.033

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