Literature DB >> 19318213

Expanding the genetic code for biological studies.

Qian Wang1, Angela R Parrish, Lei Wang.   

Abstract

Using an orthogonal tRNA-synthetase pair, unnatural amino acids can be genetically encoded with high efficiency and fidelity, and over 40 unnatural amino acids have been site-specifically incorporated into proteins in Escherichia coli, yeast, or mammalian cells. Novel chemical or physical properties embodied in these amino acids enable new means for tailored manipulation of proteins. This review summarizes the methodology and recent progress in expanding this technology to eukaryotic cells. Applications of genetically encoded unnatural amino acids are highlighted with reports on labeling and modifying proteins, probing protein structure and function, identifying and regulating protein activity, and generating proteins with new properties. Genetic incorporation of unnatural amino acids provides a powerful method for investigating a wide variety of biological processes both in vitro and in vivo.

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Year:  2009        PMID: 19318213      PMCID: PMC2696486          DOI: 10.1016/j.chembiol.2009.03.001

Source DB:  PubMed          Journal:  Chem Biol        ISSN: 1074-5521


  87 in total

1.  Site-specific incorporation of methyl- and acetyl-lysine analogues into recombinant proteins.

Authors:  Jiantao Guo; Jiangyun Wang; Jong Seok Lee; Peter G Schultz
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

2.  Chemically ubiquitylated histone H2B stimulates hDot1L-mediated intranucleosomal methylation.

Authors:  Robert K McGinty; Jaehoon Kim; Champak Chatterjee; Robert G Roeder; Tom W Muir
Journal:  Nature       Date:  2008-04-30       Impact factor: 49.962

3.  Expanding the genetic code of Escherichia coli.

Authors:  L Wang; A Brock; B Herberich; P G Schultz
Journal:  Science       Date:  2001-04-20       Impact factor: 47.728

4.  An unusually compact external promoter for RNA polymerase III transcription of the human H1RNA gene.

Authors:  E Myslinski; J C Amé; A Krol; P Carbon
Journal:  Nucleic Acids Res       Date:  2001-06-15       Impact factor: 16.971

5.  A general approach for the generation of orthogonal tRNAs.

Authors:  L Wang; P G Schultz
Journal:  Chem Biol       Date:  2001-09

6.  Adding L-3-(2-Naphthyl)alanine to the genetic code of E. coli.

Authors:  Lei Wang; Ansgar Brock; Peter G Schultz
Journal:  J Am Chem Soc       Date:  2002-03-06       Impact factor: 15.419

7.  Pyrrolysine encoded by UAG in Archaea: charging of a UAG-decoding specialized tRNA.

Authors:  Gayathri Srinivasan; Carey M James; Joseph A Krzycki
Journal:  Science       Date:  2002-05-24       Impact factor: 47.728

8.  Biosynthesis of a site-specific DNA cleaving protein.

Authors:  Hyun Soo Lee; Peter G Schultz
Journal:  J Am Chem Soc       Date:  2008-09-13       Impact factor: 15.419

9.  In vivo incorporation of unnatural amino acids to probe structure, dynamics, and ligand binding in a large protein by nuclear magnetic resonance spectroscopy.

Authors:  Susan E Cellitti; David H Jones; Leanna Lagpacan; Xueshi Hao; Qiong Zhang; Huiyong Hu; Scott M Brittain; Achim Brinker; Jeremy Caldwell; Badry Bursulaya; Glen Spraggon; Ansgar Brock; Youngha Ryu; Tetsuo Uno; Peter G Schultz; Bernhard H Geierstanger
Journal:  J Am Chem Soc       Date:  2008-06-25       Impact factor: 15.419

10.  Immunochemical termination of self-tolerance.

Authors:  Jan Grünewald; Meng-Lin Tsao; Roshan Perera; Liqun Dong; Frank Niessen; Ben G Wen; Diane M Kubitz; Vaughn V Smider; Wolfram Ruf; Marc Nasoff; Richard A Lerner; Peter G Schultz
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-06       Impact factor: 11.205

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  68 in total

1.  Genetic incorporation of unnatural amino acids into proteins in yeast.

Authors:  Qian Wang; Lei Wang
Journal:  Methods Mol Biol       Date:  2012

Review 2.  Optimizing non-natural protein function with directed evolution.

Authors:  Eric M Brustad; Frances H Arnold
Journal:  Curr Opin Chem Biol       Date:  2010-12-23       Impact factor: 8.822

3.  Photo-cross-linkers incorporated into G-protein-coupled receptors in mammalian cells: a ligand comparison.

Authors:  Irene Coin; Marilyn H Perrin; Wylie W Vale; Lei Wang
Journal:  Angew Chem Int Ed Engl       Date:  2011-07-12       Impact factor: 15.336

4.  Esterification of an unnatural amino acid structurally deviating from canonical amino acids promotes its uptake and incorporation into proteins in mammalian cells.

Authors:  Jeffrey K Takimoto; Zheng Xiang; Ji-Yong Kang; Lei Wang
Journal:  Chembiochem       Date:  2010-11-02       Impact factor: 3.164

5.  Light-induced protein translocation by genetically encoded unnatural amino acid in Caenorhabditis elegans.

Authors:  Hao Chang; Mei Han; Wenming Huang; Guifeng Wei; Juanjuan Chen; Peng R Chen; Runsheng Chen; Junlong Zhang; Tao Xu; Pingyong Xu
Journal:  Protein Cell       Date:  2013-12       Impact factor: 14.870

6.  Anion-π interactions in complexes of proteins and halogen-containing amino acids.

Authors:  Sunčica Z Borozan; Mario V Zlatović; Srđan Đ Stojanović
Journal:  J Biol Inorg Chem       Date:  2016-02-24       Impact factor: 3.358

7.  Genetically Encoding Unnatural Amino Acids in Neurons In Vitro and in the Embryonic Mouse Brain for Optical Control of Neuronal Proteins.

Authors:  Ji-Yong Kang; Daichi Kawaguchi; Lei Wang
Journal:  Methods Mol Biol       Date:  2018

8.  Genetically encoding unnatural amino acids in neural stem cells and optically reporting voltage-sensitive domain changes in differentiated neurons.

Authors:  Bin Shen; Zheng Xiang; Barbara Miller; Gordon Louie; Wenyuan Wang; Joseph P Noel; Fred H Gage; Lei Wang
Journal:  Stem Cells       Date:  2011-08       Impact factor: 6.277

Review 9.  Incorporation of Non-Canonical Amino Acids.

Authors:  Lilia Leisle; Francis Valiyaveetil; Ryan A Mehl; Christopher A Ahern
Journal:  Adv Exp Med Biol       Date:  2015       Impact factor: 2.622

10.  Expression of fluorescent cyclotides using protein trans-splicing for easy monitoring of cyclotide-protein interactions.

Authors:  Krishnappa Jagadish; Radhika Borra; Vanessa Lacey; Subhabrata Majumder; Alexander Shekhtman; Lei Wang; Julio A Camarero
Journal:  Angew Chem Int Ed Engl       Date:  2013-01-15       Impact factor: 15.336

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