Literature DB >> 19301865

Ring strain energy in the cyclooctyl system. The effect of strain energy on [3 + 2] cycloaddition reactions with azides.

Robert D Bach1.   

Abstract

Ring strain energies (SEs) and enthalpies of hydrogenation (DeltaH(hyd)) of a series of E- and Z-alkenes, cyclic alkynes and allenes (C(5)-C(9)) are computed at the G3 level of theory. The SE for cycloheptyne, cyclohexyne, and cyclopentyne are calculated to be 25.4, 40.1, and 48.4 kcal/mol, respectively. The SE for E-cycloheptene and E-cyclohexene are calculated to be 25.2 and 49.3 kcal/mol (G3). The SE of cyclooctyne is 2.0 kcal/mol greater than that of E-cyclooctene (17.9 kcal/mol) but only 7.7 kcal/mol greater than that of cyclooctane. The SE of 3,3-difluorocyclooctyne (DIFO) is predicted to be slightly reduced (DeltaSE = 2.6 kcal/mol) relative to the parent cyclooctyne to 17.3 kcal/mol. The SE and DeltaH(hyd) are correlated with activation barriers for the [3 + 2] cycloaddition of a series of azides to E- and Z-cycloalkenes and alkynes at the G3 level of theory. The energy barrier for the cycloaddition of methyl azide to cyclooctyne is 9.2 kcal/mol lower than addition to 4-octyne and 3.1 kcal/mol lower for reaction with E-cyclooctene. The activation energies for [3 + 2] cycloaddition of benzyl azide and acetamido azide ((2)HN(C=O)CH(2)-N(3)) to DIFO are 2.3 and 5.3 kcal/mol lower in energy than cycloaddition to cyclooctyne [B3LYP/6-311+G(3df,2p)].

Entities:  

Year:  2009        PMID: 19301865     DOI: 10.1021/ja8094137

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  24 in total

1.  An efficient computational model to predict the synthetic utility of heterocyclic arynes.

Authors:  Adam E Goetz; Sarah M Bronner; Jordan D Cisneros; Joshua M Melamed; Robert S Paton; K N Houk; Neil K Garg
Journal:  Angew Chem Int Ed Engl       Date:  2012-02-03       Impact factor: 15.336

Review 2.  Bioorthogonal chemistry: recent progress and future directions.

Authors:  Reyna K V Lim; Qing Lin
Journal:  Chem Commun (Camb)       Date:  2010-01-21       Impact factor: 6.222

3.  Metal-free sequential [3 + 2]-dipolar cycloadditions using cyclooctynes and 1,3-dipoles of different reactivity.

Authors:  Brian C Sanders; Frédéric Friscourt; Petr A Ledin; Ngalle Eric Mbua; Selvanathan Arumugam; Jun Guo; Thomas J Boltje; Vladimir V Popik; Geert-Jan Boons
Journal:  J Am Chem Soc       Date:  2010-12-23       Impact factor: 15.419

Review 4.  18 F-Labeling of Sensitive Biomolecules for Positron Emission Tomography.

Authors:  Hema S Krishnan; Longle Ma; Neil Vasdev; Steven H Liang
Journal:  Chemistry       Date:  2017-09-01       Impact factor: 5.236

5.  Developing bioorthogonal probes to span a spectrum of reactivities.

Authors:  Sean S Nguyen; Jennifer A Prescher
Journal:  Nat Rev Chem       Date:  2020-07-21       Impact factor: 34.035

6.  AlCl₃-Catalyzed Ring Expansion Cascades of Bicyclic Cyclobutenamides Involving Highly Strained Cis,Trans-Cycloheptadienone Intermediates.

Authors:  Xiao-Na Wang; Elizabeth H Krenske; Ryne C Johnston; K N Houk; Richard P Hsung
Journal:  J Am Chem Soc       Date:  2015-04-20       Impact factor: 15.419

7.  Strain-promoted alkyne-azide cycloadditions (SPAAC) reveal new features of glycoconjugate biosynthesis.

Authors:  Ngalle Eric Mbua; Jun Guo; Margreet A Wolfert; Richard Steet; Geert-Jan Boons
Journal:  Chembiochem       Date:  2011-06-09       Impact factor: 3.164

8.  Diazo Compounds as Highly Tunable Reactants in 1,3-Dipolar Cycloaddition Reactions with Cycloalkynes().

Authors:  Nicholas A McGrath; Ronald T Raines
Journal:  Chem Sci       Date:  2012-08-02       Impact factor: 9.825

9.  Copper-free click chemistry in living animals.

Authors:  Pamela V Chang; Jennifer A Prescher; Ellen M Sletten; Jeremy M Baskin; Isaac A Miller; Nicholas J Agard; Anderson Lo; Carolyn R Bertozzi
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-14       Impact factor: 11.205

10.  Difluorobenzocyclooctyne: synthesis, reactivity, and stabilization by beta-cyclodextrin.

Authors:  Ellen M Sletten; Hitomi Nakamura; John C Jewett; Carolyn R Bertozzi
Journal:  J Am Chem Soc       Date:  2010-08-25       Impact factor: 15.419

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.