Literature DB >> 21661087

Strain-promoted alkyne-azide cycloadditions (SPAAC) reveal new features of glycoconjugate biosynthesis.

Ngalle Eric Mbua1, Jun Guo, Margreet A Wolfert, Richard Steet, Geert-Jan Boons.   

Abstract

We have shown that 4-dibenzocyclooctynol (DIBO), which can easily be obtained by a streamlined synthesis approach, reacts exceptionally fast in the absence of a Cu(I) catalyst with azido-containing compounds to give stable triazoles. Chemical modifications of DIBO, such as oxidation of the alcohol to a ketone, increased the rate of strain promoted azide-alkyne cycloadditions (SPAAC). Installment of a ketone or oxime in the cyclooctyne ring resulted in fluorescent active compounds whereas this property was absent in the corresponding cycloaddition adducts; this provides the first example of a metal-free alkyne-azide fluoro-switch click reaction. The alcohol or ketone functions of the cyclooctynes offer a chemical handle to install a variety of different tags, and thereby facilitate biological studies. It was found that DIBO modified with biotin combined with metabolic labeling with an azido-containing monosaccharide can determine relative quantities of sialic acid of living cells that have defects in glycosylation (Lec CHO cells). A combined use of metabolic labeling/SPAAC and lectin staining of cells that have defects in the conserved oligomeric Golgi (COG) complex revealed that such defects have a greater impact on O-glycan sialylation than galactosylation, whereas sialylation and galactosylation of N-glycans was similarly impacted. These results highlight the fact that the fidelity of Golgi trafficking is a critical parameter for the types of oligosaccharides being biosynthesized by a cell. Furthermore, by modulating the quantity of biosynthesized sugar nucleotide, cells might have a means to selectively alter specific glycan structures of glycoproteins.
Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2011        PMID: 21661087      PMCID: PMC3151320          DOI: 10.1002/cbic.201100117

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  51 in total

1.  Nucleophilic catalysis of oxime ligation.

Authors:  Anouk Dirksen; Tilman M Hackeng; Philip E Dawson
Journal:  Angew Chem Int Ed Engl       Date:  2006-11-20       Impact factor: 15.336

2.  Isolation of Chinese hamster cell mutants defective in the receptor-mediated endocytosis of low density lipoprotein.

Authors:  M Krieger; M S Brown; J L Goldstein
Journal:  J Mol Biol       Date:  1981-08-05       Impact factor: 5.469

3.  Biosynthesis of truncated O-glycans in the T cell line Jurkat. Localization of O-glycan initiation.

Authors:  V Piller; F Piller; M Fukuda
Journal:  J Biol Chem       Date:  1990-06-05       Impact factor: 5.157

4.  Conserved oligomeric Golgi complex subunit 1 deficiency reveals a previously uncharacterized congenital disorder of glycosylation type II.

Authors:  François Foulquier; Eliza Vasile; Els Schollen; Nico Callewaert; Tim Raemaekers; Dulce Quelhas; Jaak Jaeken; Philippa Mills; Bryan Winchester; Monty Krieger; Wim Annaert; Gert Matthijs
Journal:  Proc Natl Acad Sci U S A       Date:  2006-02-28       Impact factor: 11.205

5.  The COG and COPI complexes interact to control the abundance of GEARs, a subset of Golgi integral membrane proteins.

Authors:  Toshihiko Oka; Daniel Ungar; Frederick M Hughson; Monty Krieger
Journal:  Mol Biol Cell       Date:  2004-03-05       Impact factor: 4.138

6.  Copper-free click chemistry for the in situ crosslinking of photodegradable star polymers.

Authors:  Jeremiah A Johnson; Jeremy M Baskin; Carolyn R Bertozzi; Jeffrey T Koberstein; Nicholas J Turro
Journal:  Chem Commun (Camb)       Date:  2008-04-24       Impact factor: 6.222

Review 7.  Deficiencies in subunits of the Conserved Oligomeric Golgi (COG) complex define a novel group of Congenital Disorders of Glycosylation.

Authors:  Renate Zeevaert; François Foulquier; Jaak Jaeken; Gert Matthijs
Journal:  Mol Genet Metab       Date:  2007-09-29       Impact factor: 4.797

8.  Ring strain energy in the cyclooctyl system. The effect of strain energy on [3 + 2] cycloaddition reactions with azides.

Authors:  Robert D Bach
Journal:  J Am Chem Soc       Date:  2009-04-15       Impact factor: 15.419

9.  Glycomics profiling of Chinese hamster ovary cell glycosylation mutants reveals N-glycans of a novel size and complexity.

Authors:  Simon J North; Hung-Hsiang Huang; Subha Sundaram; Jihye Jang-Lee; A Tony Etienne; Alana Trollope; Sara Chalabi; Anne Dell; Pamela Stanley; Stuart M Haslam
Journal:  J Biol Chem       Date:  2009-12-01       Impact factor: 5.157

10.  Differential involvement of cell surface sialic acid residues in wheat germ agglutinin binding to parental and wheat germ agglutinin-resistant Chinese hamster ovary cells.

Authors:  P Stanley; T Sudo; J P Carver
Journal:  J Cell Biol       Date:  1980-04       Impact factor: 10.539

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  28 in total

1.  Polar dibenzocyclooctynes for selective labeling of extracellular glycoconjugates of living cells.

Authors:  Frédéric Friscourt; Petr A Ledin; Ngalle Eric Mbua; Heather R Flanagan-Steet; Margreet A Wolfert; Richard Steet; Geert-Jan Boons
Journal:  J Am Chem Soc       Date:  2012-03-09       Impact factor: 15.419

2.  Visualizing specific protein glycoforms by transmembrane fluorescence resonance energy transfer.

Authors:  Yoshimi Haga; Kumiko Ishii; Kayo Hibino; Yasushi Sako; Yukishige Ito; Naoyuki Taniguchi; Tadashi Suzuki
Journal:  Nat Commun       Date:  2012-06-19       Impact factor: 14.919

3.  Selective exo-enzymatic labeling of N-glycans on the surface of living cells by recombinant ST6Gal I.

Authors:  Ngalle Eric Mbua; Xiuru Li; Heather R Flanagan-Steet; Lu Meng; Kazuhiro Aoki; Kelley W Moremen; Margreet A Wolfert; Richard Steet; Geert-Jan Boons
Journal:  Angew Chem Int Ed Engl       Date:  2013-10-15       Impact factor: 15.336

4.  Defective mucin-type glycosylation on α-dystroglycan in COG-deficient cells increases its susceptibility to bacterial proteases.

Authors:  Seok-Ho Yu; Peng Zhao; Pradeep K Prabhakar; Tiantian Sun; Aaron Beedle; Geert-Jan Boons; Kelley W Moremen; Lance Wells; Richard Steet
Journal:  J Biol Chem       Date:  2018-07-26       Impact factor: 5.157

5.  Fine-Tuning Strain and Electronic Activation of Strain-Promoted 1,3-Dipolar Cycloadditions with Endocyclic Sulfamates in SNO-OCTs.

Authors:  Eileen G Burke; Brian Gold; Trish T Hoang; Ronald T Raines; Jennifer M Schomaker
Journal:  J Am Chem Soc       Date:  2017-05-31       Impact factor: 15.419

6.  Efficient and Site-specific Antibody Labeling by Strain-promoted Azide-alkyne Cycloaddition.

Authors:  Sanggil Kim; Wooseok Ko; Hyunji Park; Hyun Soo Lee
Journal:  J Vis Exp       Date:  2016-12-23       Impact factor: 1.355

7.  A fluorogenic probe for the catalyst-free detection of azide-tagged molecules.

Authors:  Frédéric Friscourt; Christoph J Fahrni; Geert-Jan Boons
Journal:  J Am Chem Soc       Date:  2012-11-02       Impact factor: 15.419

Review 8.  Chemistry-enabled methods for the visualization of cell-surface glycoproteins in Metazoans.

Authors:  Kelly N Chuh; Matthew R Pratt
Journal:  Glycoconj J       Date:  2015-04-28       Impact factor: 2.916

9.  Diazo Compounds as Highly Tunable Reactants in 1,3-Dipolar Cycloaddition Reactions with Cycloalkynes().

Authors:  Nicholas A McGrath; Ronald T Raines
Journal:  Chem Sci       Date:  2012-08-02       Impact factor: 9.825

10.  Selective Exo-Enzymatic Labeling Detects Increased Cell Surface Sialoglycoprotein Expression upon Megakaryocytic Differentiation.

Authors:  Seok-Ho Yu; Peng Zhao; Tiantian Sun; Zhongwei Gao; Kelley W Moremen; Geert-Jan Boons; Lance Wells; Richard Steet
Journal:  J Biol Chem       Date:  2016-01-05       Impact factor: 5.157

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